Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 AC139749.1-202ENST00000617529 3139 ntBASIC12.04□□□□□ -0.48
VPS13CQ709C8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 AGGF1P1-201ENST00000509500 2073 ntBASIC12.04□□□□□ -0.48
VPS13CQ709C8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 AC005014.1-201ENST00000432006 2976 ntBASIC12.03□□□□□ -0.48
VPS13CQ709C8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 GCOM2-201ENST00000509133 1104 ntBASIC12.03□□□□□ -0.48
VPS13CQ709C8 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 EMC4-208ENST00000559078 599 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.03□□□□□ -0.48
VPS13CQ709C8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 AC233280.19-201ENST00000633223 136 ntBASIC12.03□□□□□ -0.48
VPS13CQ709C8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
VPS13CQ709C8 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13CQ709C8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13CQ709C8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
VPS13CQ709C8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.02□□□□□ -0.48
VPS13CQ709C8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13CQ709C8 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13CQ709C8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13CQ709C8 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
VPS13CQ709C8 MIR1301-201ENST00000408518 82 ntBASIC12.02□□□□□ -0.48
VPS13CQ709C8 AL929302.1-201ENST00000426556 871 ntBASIC12.02□□□□□ -0.48
VPS13CQ709C8 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC12.02□□□□□ -0.48
VPS13CQ709C8 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13CQ709C8 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
VPS13CQ709C8 AC008972.2-201ENST00000606587 494 ntBASIC12.02□□□□□ -0.48
VPS13CQ709C8 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.02□□□□□ -0.48
VPS13CQ709C8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.02□□□□□ -0.48
VPS13CQ709C8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13CQ709C8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
VPS13CQ709C8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13CQ709C8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.02□□□□□ -0.48
VPS13CQ709C8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13CQ709C8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
VPS13CQ709C8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
VPS13CQ709C8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
VPS13CQ709C8 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VPS13CQ709C8 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC12.02□□□□□ -0.49
VPS13CQ709C8 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.02□□□□□ -0.49
VPS13CQ709C8 AC083801.1-201ENST00000491689 358 ntBASIC12.02□□□□□ -0.49
VPS13CQ709C8 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.02□□□□□ -0.49
VPS13CQ709C8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
VPS13CQ709C8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms