Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.66■□□□□ 0.1
FOXR1Q6PIV2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
FOXR1Q6PIV2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.66■□□□□ 0.1
FOXR1Q6PIV2 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXR1Q6PIV2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FOXR1Q6PIV2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
FOXR1Q6PIV2 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.66■□□□□ 0.1
FOXR1Q6PIV2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXR1Q6PIV2 AC007326.2-201ENST00000624224 7579 ntBASIC15.66■□□□□ 0.1
FOXR1Q6PIV2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.66■□□□□ 0.1
FOXR1Q6PIV2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 WASH3P-207ENST00000560956 1394 ntBASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 AC098614.1-201ENST00000368528 745 ntBASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 AC008494.3-201ENST00000606615 944 ntBASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXR1Q6PIV2 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
FOXR1Q6PIV2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.64■□□□□ 0.1
FOXR1Q6PIV2 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
FOXR1Q6PIV2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 AC015818.8-201ENST00000587907 1519 ntBASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 AC068760.1-201ENST00000493579 1953 ntBASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 AC087499.6-201ENST00000411576 835 ntBASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 DOC2GP-202ENST00000514950 1163 ntBASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 AC132938.2-201ENST00000579188 680 ntBASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 AC017083.2-201ENST00000608069 979 ntBASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 AL591163.1-201ENST00000641757 987 ntBASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
FOXR1Q6PIV2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
FOXR1Q6PIV2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms