Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 GALC-206ENST00000544807 2528 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 AL645937.2-201ENST00000396808 931 ntBASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 KRT18P58-201ENST00000527480 1120 ntBASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 TUBB3P1-201ENST00000405796 1332 ntBASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AC023141.5-201ENST00000458585 616 ntBASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 MIR4469-201ENST00000583919 79 ntBASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms