Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 DUX4L46-201ENST00000566845 751 ntBASIC13.03□□□□□ -0.32
FREM1Q5H8C1 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 AC007663.3-201ENST00000609632 465 ntBASIC13.03□□□□□ -0.32
FREM1Q5H8C1 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
FREM1Q5H8C1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 E2F3P2-201ENST00000447755 1422 ntBASIC13.02□□□□□ -0.32
FREM1Q5H8C1 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.02□□□□□ -0.32
FREM1Q5H8C1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 KLF2P1-201ENST00000447438 1042 ntBASIC13.02□□□□□ -0.33
FREM1Q5H8C1 MARK2P5-201ENST00000507649 634 ntBASIC13.02□□□□□ -0.33
FREM1Q5H8C1 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 AL136301.1-201ENST00000615830 422 ntBASIC13.02□□□□□ -0.33
FREM1Q5H8C1 AL023803.2-201ENST00000620080 638 ntBASIC13.02□□□□□ -0.33
FREM1Q5H8C1 AC139712.1-201ENST00000378256 1875 ntBASIC13.02□□□□□ -0.33
FREM1Q5H8C1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.02□□□□□ -0.33
FREM1Q5H8C1 MBLAC2-202ENST00000514906 1936 ntBASIC13.01□□□□□ -0.33
FREM1Q5H8C1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 AL354702.1-201ENST00000442006 1960 ntBASIC13.01□□□□□ -0.33
FREM1Q5H8C1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 AC023310.1-201ENST00000554836 735 ntBASIC13.01□□□□□ -0.33
FREM1Q5H8C1 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.01□□□□□ -0.33
FREM1Q5H8C1 MIR3615-201ENST00000581999 87 ntBASIC13.01□□□□□ -0.33
FREM1Q5H8C1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms