Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 BOLA2P3-201ENST00000404566 256 ntBASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 MIR1909-201ENST00000411312 80 ntBASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 AC026954.1-201ENST00000429771 1293 ntBASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 ACA64.2-201ENST00000459014 129 ntBASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
PTPN20Q4JDL3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 AC006504.5-208ENST00000588784 2401 ntBASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 KLF2P4-201ENST00000451959 1225 ntBASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 HILS1-202ENST00000545329 423 ntBASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 AC002472.3-201ENST00000640124 621 ntBASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 AHCYP2-201ENST00000430630 1300 ntBASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN20Q4JDL3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 AL590440.2-201ENST00000641973 1595 ntBASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN20Q4JDL3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms