Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 AC091046.1-201ENST00000331871 207 ntBASIC17.3■□□□□ 0.36
CERKLQ49MI3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 RN7SL190P-201ENST00000582519 257 ntBASIC17.3■□□□□ 0.36
CERKLQ49MI3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 AC133540.1-201ENST00000620845 1019 ntBASIC17.3■□□□□ 0.36
CERKLQ49MI3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 KRT8P21-201ENST00000430398 1491 ntBASIC17.3■□□□□ 0.36
CERKLQ49MI3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CERKLQ49MI3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CERKLQ49MI3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.29■□□□□ 0.36
CERKLQ49MI3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 AC239868.1-201ENST00000369385 493 ntBASIC17.29■□□□□ 0.36
CERKLQ49MI3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 AL157813.1-201ENST00000612996 587 ntBASIC17.29■□□□□ 0.36
CERKLQ49MI3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CERKLQ49MI3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.29■□□□□ 0.36
CERKLQ49MI3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms