Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC27Q2M243 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC27Q2M243 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC27Q2M243 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC27Q2M243 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC27Q2M243 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC27Q2M243 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.27■□□□□ 0.67
CCDC27Q2M243 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
CCDC27Q2M243 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC27Q2M243 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC27Q2M243 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC27Q2M243 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CCDC27Q2M243 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 RN7SL832P-201ENST00000607781 1756 ntBASIC19.26■□□□□ 0.67
CCDC27Q2M243 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC27Q2M243 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC27Q2M243 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 AC027237.1-201ENST00000560942 655 ntBASIC19.25■□□□□ 0.67
CCDC27Q2M243 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 Z98259.2-201ENST00000641583 609 ntBASIC19.25■□□□□ 0.67
CCDC27Q2M243 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC27Q2M243 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 GOLGA8DP-202ENST00000341390 2184 ntBASIC19.25■□□□□ 0.67
CCDC27Q2M243 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC27Q2M243 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 AC244394.1-201ENST00000435000 1665 ntBASIC19.24■□□□□ 0.67
CCDC27Q2M243 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 MIR663B-201ENST00000408361 115 ntBASIC19.24■□□□□ 0.67
CCDC27Q2M243 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.24■□□□□ 0.67
CCDC27Q2M243 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 FAM58BP-201ENST00000439056 645 ntBASIC19.24■□□□□ 0.67
CCDC27Q2M243 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 Z93015.1-201ENST00000451718 390 ntBASIC19.24■□□□□ 0.67
CCDC27Q2M243 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.24■□□□□ 0.67
CCDC27Q2M243 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 RN7SL560P-201ENST00000577943 264 ntBASIC19.24■□□□□ 0.67
CCDC27Q2M243 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms