Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD47Q08722 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.92□□□□□ -0.18
CD47Q08722 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CD47Q08722 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.92□□□□□ -0.18
CD47Q08722 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD47Q08722 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD47Q08722 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.92□□□□□ -0.18
CD47Q08722 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.92□□□□□ -0.18
CD47Q08722 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.92□□□□□ -0.18
CD47Q08722 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.92□□□□□ -0.18
CD47Q08722 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.92□□□□□ -0.18
CD47Q08722 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CD47Q08722 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.91□□□□□ -0.18
CD47Q08722 Z97205.2-201ENST00000564697 1639 ntBASIC13.91□□□□□ -0.18
CD47Q08722 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.91□□□□□ -0.18
CD47Q08722 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.91□□□□□ -0.18
CD47Q08722 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.91□□□□□ -0.18
CD47Q08722 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 AC051619.7-201ENST00000568314 623 ntBASIC13.91□□□□□ -0.18
CD47Q08722 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.91□□□□□ -0.18
CD47Q08722 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.91□□□□□ -0.18
CD47Q08722 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.91□□□□□ -0.18
CD47Q08722 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.91□□□□□ -0.18
CD47Q08722 AC139530.3-201ENST00000620344 690 ntBASIC13.91□□□□□ -0.18
CD47Q08722 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.91□□□□□ -0.18
CD47Q08722 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CD47Q08722 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CD47Q08722 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.91□□□□□ -0.18
CD47Q08722 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD47Q08722 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
CD47Q08722 AGGF1P1-201ENST00000509500 2073 ntBASIC13.91□□□□□ -0.18
CD47Q08722 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CD47Q08722 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 AC012617.1-204ENST00000586340 2305 ntBASIC13.9□□□□□ -0.18
CD47Q08722 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.9□□□□□ -0.18
CD47Q08722 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD47Q08722 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD47Q08722 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.9□□□□□ -0.18
CD47Q08722 AC074338.1-201ENST00000416825 156 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms