Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDR1Q08345 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.16■□□□□ 0.5
DDR1Q08345 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDR1Q08345 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDR1Q08345 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
DDR1Q08345 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
DDR1Q08345 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDR1Q08345 AC006504.5-208ENST00000588784 2401 ntBASIC18.15■□□□□ 0.5
DDR1Q08345 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
DDR1Q08345 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.15■□□□□ 0.5
DDR1Q08345 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.15■□□□□ 0.5
DDR1Q08345 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
DDR1Q08345 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC18.15■□□□□ 0.5
DDR1Q08345 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 AC095040.1-201ENST00000513286 675 ntBASIC18.15■□□□□ 0.5
DDR1Q08345 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.15■□□□□ 0.5
DDR1Q08345 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 AC139712.1-201ENST00000378256 1875 ntBASIC18.15■□□□□ 0.5
DDR1Q08345 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
DDR1Q08345 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.15■□□□□ 0.5
DDR1Q08345 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.15■□□□□ 0.5
DDR1Q08345 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDR1Q08345 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
DDR1Q08345 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.5
DDR1Q08345 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
DDR1Q08345 BRD7P5-201ENST00000299197 1822 ntBASIC18.14■□□□□ 0.5
DDR1Q08345 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DDR1Q08345 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 AL672207.1-201ENST00000328462 1570 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.14■□□□□ 0.49
DDR1Q08345 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 PYY2-201ENST00000315776 282 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.14■□□□□ 0.49
DDR1Q08345 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.14■□□□□ 0.49
DDR1Q08345 AL135901.1-201ENST00000451812 333 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.14■□□□□ 0.49
DDR1Q08345 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.14■□□□□ 0.49
DDR1Q08345 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.14■□□□□ 0.49
DDR1Q08345 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.14■□□□□ 0.49
DDR1Q08345 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.14■□□□□ 0.49
DDR1Q08345 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DDR1Q08345 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 FAM90A21P-201ENST00000510875 1396 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 FAM90A15P-201ENST00000514465 1395 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 FAM90A6P-201ENST00000515148 1394 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 FAM90A16P-201ENST00000526662 1395 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 FAM90A9P-201ENST00000527940 1395 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 FAM90A5P-201ENST00000528738 1395 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 FAM90A14P-201ENST00000530386 1395 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 FAM90A13P-201ENST00000534703 1395 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.14■□□□□ 0.49
DDR1Q08345 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
DDR1Q08345 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.14■□□□□ 0.49
DDR1Q08345 AC092135.3-201ENST00000624151 1846 ntBASIC18.14■□□□□ 0.49
DDR1Q08345 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDR1Q08345 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms