Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP1Q04837 GAPDHP40-201ENST00000505218 1006 ntBASIC12.63□□□□□ -0.39
SSBP1Q04837 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.63□□□□□ -0.39
SSBP1Q04837 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.63□□□□□ -0.39
SSBP1Q04837 KRT18P8-201ENST00000581937 1246 ntBASIC12.63□□□□□ -0.39
SSBP1Q04837 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
SSBP1Q04837 AC003101.2-201ENST00000612557 442 ntBASIC12.63□□□□□ -0.39
SSBP1Q04837 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP1Q04837 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP1Q04837 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SSBP1Q04837 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
SSBP1Q04837 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 TUBB8P4-201ENST00000511806 1324 ntBASIC12.62□□□□□ -0.39
SSBP1Q04837 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP1Q04837 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
SSBP1Q04837 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP1Q04837 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP1Q04837 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSBP1Q04837 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SSBP1Q04837 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP1Q04837 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP1Q04837 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 AL591424.1-201ENST00000442569 1213 ntBASIC12.62□□□□□ -0.39
SSBP1Q04837 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP1Q04837 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP1Q04837 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.62□□□□□ -0.39
SSBP1Q04837 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP1Q04837 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 BEND3P3-201ENST00000611030 2440 ntBASIC12.62□□□□□ -0.39
SSBP1Q04837 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
SSBP1Q04837 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSBP1Q04837 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSBP1Q04837 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP1Q04837 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP1Q04837 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
SSBP1Q04837 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP1Q04837 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SSBP1Q04837 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP1Q04837 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
SSBP1Q04837 AC072061.1-201ENST00000569710 2234 ntBASIC12.61□□□□□ -0.39
SSBP1Q04837 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms