Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SCN7AQ01118 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.98■□□□□ 0.47
SCN7AQ01118 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.98■□□□□ 0.47
SCN7AQ01118 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.98■□□□□ 0.47
SCN7AQ01118 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.98■□□□□ 0.47
SCN7AQ01118 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.98■□□□□ 0.47
SCN7AQ01118 GNG10P1-201ENST00000452289 199 ntBASIC17.98■□□□□ 0.47
SCN7AQ01118 AC244197.1-201ENST00000456494 951 ntBASIC17.98■□□□□ 0.47
SCN7AQ01118 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 AC022447.6-201ENST00000515522 438 ntBASIC17.98■□□□□ 0.47
SCN7AQ01118 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SCN7AQ01118 AC226150.1-201ENST00000544259 466 ntBASIC17.98■□□□□ 0.47
SCN7AQ01118 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.98■□□□□ 0.47
SCN7AQ01118 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.98■□□□□ 0.47
SCN7AQ01118 AL021707.6-201ENST00000609212 491 ntBASIC17.98■□□□□ 0.47
SCN7AQ01118 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.98■□□□□ 0.47
SCN7AQ01118 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCN7AQ01118 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SCN7AQ01118 AC006486.2-201ENST00000624246 2199 ntBASIC17.98■□□□□ 0.47
SCN7AQ01118 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.98■□□□□ 0.47
SCN7AQ01118 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.97■□□□□ 0.47
SCN7AQ01118 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.97■□□□□ 0.47
SCN7AQ01118 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SCN7AQ01118 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 KRT17P4-201ENST00000429445 819 ntBASIC17.97■□□□□ 0.47
SCN7AQ01118 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.97■□□□□ 0.47
SCN7AQ01118 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.97■□□□□ 0.47
SCN7AQ01118 AC006529.1-201ENST00000459978 637 ntBASIC17.97■□□□□ 0.47
SCN7AQ01118 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.97■□□□□ 0.47
SCN7AQ01118 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.97■□□□□ 0.47
SCN7AQ01118 AP005264.6-204ENST00000588436 719 ntBASIC17.97■□□□□ 0.47
SCN7AQ01118 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.97■□□□□ 0.47
SCN7AQ01118 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.97■□□□□ 0.47
SCN7AQ01118 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SCN7AQ01118 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SCN7AQ01118 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.97■□□□□ 0.47
SCN7AQ01118 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
SCN7AQ01118 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
SCN7AQ01118 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SCN7AQ01118 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.97■□□□□ 0.47
SCN7AQ01118 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SCN7AQ01118 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SCN7AQ01118 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.97■□□□□ 0.47
SCN7AQ01118 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SCN7AQ01118 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.97■□□□□ 0.47
SCN7AQ01118 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.97■□□□□ 0.47
SCN7AQ01118 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.96■□□□□ 0.47
SCN7AQ01118 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 CICP6-201ENST00000457191 2729 ntBASIC17.96■□□□□ 0.47
SCN7AQ01118 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 KRT8P18-201ENST00000413425 1445 ntBASIC17.96■□□□□ 0.47
SCN7AQ01118 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SCN7AQ01118 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.96■□□□□ 0.47
SCN7AQ01118 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SCN7AQ01118 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.96■□□□□ 0.47
SCN7AQ01118 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 AC006987.1-201ENST00000413610 527 ntBASIC17.96■□□□□ 0.47
SCN7AQ01118 BX679664.3-201ENST00000414070 555 ntBASIC17.96■□□□□ 0.47
SCN7AQ01118 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 RPL35P9-201ENST00000446059 350 ntBASIC17.96■□□□□ 0.47
SCN7AQ01118 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 AC113935.1-201ENST00000471722 555 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms