Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
EFNB1P98172 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNB1P98172 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNB1P98172 AC135586.1-201ENST00000539323 574 ntBASIC13.29□□□□□ -0.28
EFNB1P98172 SNHG9-202ENST00000564014 471 ntBASIC13.29□□□□□ -0.28
EFNB1P98172 RRP7BP-205ENST00000566851 833 ntBASIC13.29□□□□□ -0.28
EFNB1P98172 AC120045.2-201ENST00000567334 178 ntBASIC13.29□□□□□ -0.28
EFNB1P98172 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.29□□□□□ -0.28
EFNB1P98172 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
EFNB1P98172 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.29□□□□□ -0.28
EFNB1P98172 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.29□□□□□ -0.28
EFNB1P98172 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNB1P98172 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.29□□□□□ -0.28
EFNB1P98172 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNB1P98172 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
EFNB1P98172 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNB1P98172 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNB1P98172 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
EFNB1P98172 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
EFNB1P98172 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
EFNB1P98172 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.28□□□□□ -0.28
EFNB1P98172 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.28□□□□□ -0.28
EFNB1P98172 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.28□□□□□ -0.28
EFNB1P98172 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.28□□□□□ -0.28
EFNB1P98172 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.28□□□□□ -0.28
EFNB1P98172 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.28□□□□□ -0.28
EFNB1P98172 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.28□□□□□ -0.28
EFNB1P98172 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.28□□□□□ -0.28
EFNB1P98172 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.28□□□□□ -0.28
EFNB1P98172 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.28□□□□□ -0.28
EFNB1P98172 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
EFNB1P98172 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.28□□□□□ -0.28
EFNB1P98172 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 AL590440.2-201ENST00000641973 1595 ntBASIC13.28□□□□□ -0.28
EFNB1P98172 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 NUTM2HP-201ENST00000442076 2498 ntBASIC13.28□□□□□ -0.28
EFNB1P98172 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.28□□□□□ -0.28
EFNB1P98172 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
EFNB1P98172 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.27□□□□□ -0.28
EFNB1P98172 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNB1P98172 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
EFNB1P98172 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
EFNB1P98172 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
EFNB1P98172 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.27□□□□□ -0.28
EFNB1P98172 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.27□□□□□ -0.28
EFNB1P98172 COL6A4P2-202ENST00000504443 2753 ntBASIC13.27□□□□□ -0.28
EFNB1P98172 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNB1P98172 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
EFNB1P98172 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
EFNB1P98172 INTS4P2-202ENST00000614726 2019 ntBASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms