Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.24□□□□□ -0.45
SPCS3P61009 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
SPCS3P61009 MIR4469-201ENST00000583919 79 ntBASIC12.24□□□□□ -0.45
SPCS3P61009 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 AL360270.3-201ENST00000609118 1348 ntBASIC12.24□□□□□ -0.45
SPCS3P61009 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
SPCS3P61009 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 AC099521.2-201ENST00000619354 2036 ntBASIC12.24□□□□□ -0.45
SPCS3P61009 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
SPCS3P61009 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SPCS3P61009 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SPCS3P61009 AC092135.3-201ENST00000624151 1846 ntBASIC12.23□□□□□ -0.45
SPCS3P61009 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 AL359881.3-201ENST00000602640 1721 ntBASIC12.23□□□□□ -0.45
SPCS3P61009 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.23□□□□□ -0.45
SPCS3P61009 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 AC018665.1-201ENST00000622927 1362 ntBASIC12.23□□□□□ -0.45
SPCS3P61009 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SPCS3P61009 MIR574-201ENST00000385209 96 ntBASIC12.23□□□□□ -0.45
SPCS3P61009 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.23□□□□□ -0.45
SPCS3P61009 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.23□□□□□ -0.45
SPCS3P61009 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.23□□□□□ -0.45
SPCS3P61009 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 LINC01115-203ENST00000606068 577 ntBASIC12.23□□□□□ -0.45
SPCS3P61009 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.23□□□□□ -0.45
SPCS3P61009 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.23□□□□□ -0.45
SPCS3P61009 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.23□□□□□ -0.45
SPCS3P61009 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.23□□□□□ -0.45
SPCS3P61009 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.23□□□□□ -0.45
SPCS3P61009 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.23□□□□□ -0.45
SPCS3P61009 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS3P61009 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SPCS3P61009 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.22□□□□□ -0.45
SPCS3P61009 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SPCS3P61009 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SPCS3P61009 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms