Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CDC42P60953 AL137783.1-201ENST00000623494 1896 ntBASIC13.7□□□□□ -0.22
CDC42P60953 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 PCDHA5-203ENST00000614258 4248 ntBASIC13.69□□□□□ -0.22
CDC42P60953 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CDC42P60953 AC020910.6-201ENST00000623084 1459 ntBASIC13.69□□□□□ -0.22
CDC42P60953 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CDC42P60953 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.69□□□□□ -0.22
CDC42P60953 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.69□□□□□ -0.22
CDC42P60953 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 AC040169.1-201ENST00000565382 521 ntBASIC13.69□□□□□ -0.22
CDC42P60953 AC000095.1-201ENST00000603208 874 ntBASIC13.69□□□□□ -0.22
CDC42P60953 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.69□□□□□ -0.22
CDC42P60953 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.69□□□□□ -0.22
CDC42P60953 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CDC42P60953 AC105206.1-202ENST00000314927 2368 ntBASIC13.69□□□□□ -0.22
CDC42P60953 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CDC42P60953 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CDC42P60953 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
CDC42P60953 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 AC015818.8-201ENST00000587907 1519 ntBASIC13.69□□□□□ -0.22
CDC42P60953 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDC42P60953 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.68□□□□□ -0.22
CDC42P60953 PPT1-213ENST00000641319 2388 ntBASIC13.68□□□□□ -0.22
CDC42P60953 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.68□□□□□ -0.22
CDC42P60953 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CDC42P60953 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CDC42P60953 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 RBPMS2P1-201ENST00000437762 623 ntBASIC13.68□□□□□ -0.22
CDC42P60953 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.68□□□□□ -0.22
CDC42P60953 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC42P60953 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.68□□□□□ -0.22
CDC42P60953 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.68□□□□□ -0.22
CDC42P60953 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDC42P60953 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms