Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN2P57739 VDAC1P1-201ENST00000439229 848 ntBASIC14.66□□□□□ -0.06
CLDN2P57739 PUDPP3-201ENST00000445368 636 ntBASIC14.66□□□□□ -0.06
CLDN2P57739 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.66□□□□□ -0.06
CLDN2P57739 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CLDN2P57739 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN2P57739 AC125604.1-201ENST00000496255 707 ntBASIC14.66□□□□□ -0.06
CLDN2P57739 SCARNA21-201ENST00000517026 139 ntBASIC14.66□□□□□ -0.06
CLDN2P57739 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN2P57739 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN2P57739 AC131206.1-201ENST00000538078 1211 ntBASIC14.66□□□□□ -0.06
CLDN2P57739 AC079328.1-201ENST00000560358 952 ntBASIC14.66□□□□□ -0.06
CLDN2P57739 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN2P57739 SNORD3B-2-202ENST00000571722 791 ntBASIC14.66□□□□□ -0.06
CLDN2P57739 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 MIR6720-201ENST00000611664 98 ntBASIC14.66□□□□□ -0.06
CLDN2P57739 AL136295.7-201ENST00000619226 1200 ntBASIC14.66□□□□□ -0.06
CLDN2P57739 AC027601.3-201ENST00000622907 509 ntBASIC14.66□□□□□ -0.06
CLDN2P57739 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CLDN2P57739 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLDN2P57739 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CLDN2P57739 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CLDN2P57739 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
CLDN2P57739 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN2P57739 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN2P57739 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CLDN2P57739 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CLDN2P57739 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CLDN2P57739 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CLDN2P57739 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN2P57739 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN2P57739 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CLDN2P57739 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CLDN2P57739 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN2P57739 FAM58BP-201ENST00000439056 645 ntBASIC14.65□□□□□ -0.06
CLDN2P57739 AC012441.2-201ENST00000444843 739 ntBASIC14.65□□□□□ -0.06
CLDN2P57739 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 AC012618.1-201ENST00000461223 412 ntBASIC14.65□□□□□ -0.06
CLDN2P57739 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN2P57739 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN2P57739 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN2P57739 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.65□□□□□ -0.06
CLDN2P57739 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN2P57739 FGFR3P5-201ENST00000564496 886 ntBASIC14.65□□□□□ -0.06
CLDN2P57739 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.65□□□□□ -0.06
CLDN2P57739 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN2P57739 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN2P57739 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLDN2P57739 BX088702.1-201ENST00000610784 235 ntBASIC14.65□□□□□ -0.06
CLDN2P57739 AC100757.4-201ENST00000626934 759 ntBASIC14.65□□□□□ -0.06
CLDN2P57739 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN2P57739 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN2P57739 Z98259.2-201ENST00000641583 609 ntBASIC14.65□□□□□ -0.06
CLDN2P57739 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN2P57739 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLDN2P57739 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.65□□□□□ -0.06
CLDN2P57739 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.65□□□□□ -0.06
CLDN2P57739 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CLDN2P57739 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLDN2P57739 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLDN2P57739 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLDN2P57739 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CLDN2P57739 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CLDN2P57739 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CLDN2P57739 AC103702.1-201ENST00000548801 2630 ntBASIC14.64□□□□□ -0.07
CLDN2P57739 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CLDN2P57739 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CLDN2P57739 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CLDN2P57739 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms