Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 MBLAC2-202ENST00000514906 1936 ntBASIC13.96□□□□□ -0.17
CDH12P55289 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDH12P55289 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CDH12P55289 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.96□□□□□ -0.17
CDH12P55289 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 AL137783.1-201ENST00000623494 1896 ntBASIC13.96□□□□□ -0.17
CDH12P55289 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CDH12P55289 AC131212.3-201ENST00000624087 4219 ntBASIC13.96□□□□□ -0.17
CDH12P55289 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.17
CDH12P55289 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.96□□□□□ -0.17
CDH12P55289 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.96□□□□□ -0.17
CDH12P55289 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.96□□□□□ -0.17
CDH12P55289 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.96□□□□□ -0.17
CDH12P55289 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.96□□□□□ -0.17
CDH12P55289 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.96□□□□□ -0.17
CDH12P55289 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.96□□□□□ -0.17
CDH12P55289 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.96□□□□□ -0.17
CDH12P55289 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.96□□□□□ -0.17
CDH12P55289 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDH12P55289 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDH12P55289 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDH12P55289 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDH12P55289 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.96□□□□□ -0.18
CDH12P55289 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.96□□□□□ -0.18
CDH12P55289 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.96□□□□□ -0.18
CDH12P55289 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDH12P55289 AC023090.2-201ENST00000625182 2110 ntBASIC13.96□□□□□ -0.18
CDH12P55289 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CDH12P55289 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDH12P55289 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDH12P55289 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDH12P55289 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.96□□□□□ -0.18
CDH12P55289 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CDH12P55289 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDH12P55289 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDH12P55289 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH12P55289 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDH12P55289 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH12P55289 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDH12P55289 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDH12P55289 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDH12P55289 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH12P55289 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH12P55289 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 AL512638.1-201ENST00000457493 794 ntBASIC13.95□□□□□ -0.18
CDH12P55289 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH12P55289 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.95□□□□□ -0.18
CDH12P55289 AL390955.2-201ENST00000603032 514 ntBASIC13.95□□□□□ -0.18
CDH12P55289 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.95□□□□□ -0.18
CDH12P55289 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CDH12P55289 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.95□□□□□ -0.18
CDH12P55289 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDH12P55289 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms