Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.38■□□□□ 0.21
PMS1P54277 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PMS1P54277 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PMS1P54277 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.38■□□□□ 0.21
PMS1P54277 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PMS1P54277 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PMS1P54277 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.38■□□□□ 0.21
PMS1P54277 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 AC104581.4-201ENST00000623126 3052 ntBASIC16.37■□□□□ 0.21
PMS1P54277 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PMS1P54277 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PMS1P54277 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.37■□□□□ 0.21
PMS1P54277 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.37■□□□□ 0.21
PMS1P54277 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.37■□□□□ 0.21
PMS1P54277 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PMS1P54277 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 AC138466.3-201ENST00000619983 221 ntBASIC16.37■□□□□ 0.21
PMS1P54277 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PMS1P54277 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PMS1P54277 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.36■□□□□ 0.21
PMS1P54277 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PMS1P54277 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PMS1P54277 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PMS1P54277 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.36■□□□□ 0.21
PMS1P54277 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PMS1P54277 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PMS1P54277 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PMS1P54277 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PMS1P54277 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.36■□□□□ 0.21
PMS1P54277 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PMS1P54277 AC068587.3-201ENST00000526613 355 ntBASIC16.36■□□□□ 0.21
PMS1P54277 TDH-203ENST00000531764 1110 ntBASIC16.36■□□□□ 0.21
PMS1P54277 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.36■□□□□ 0.21
PMS1P54277 AP001002.3-201ENST00000623482 206 ntBASIC16.36■□□□□ 0.21
PMS1P54277 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.36■□□□□ 0.21
PMS1P54277 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PMS1P54277 AC015688.4-201ENST00000580780 1647 ntBASIC16.36■□□□□ 0.21
PMS1P54277 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.36■□□□□ 0.21
PMS1P54277 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.36■□□□□ 0.21
PMS1P54277 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.36■□□□□ 0.21
PMS1P54277 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.36■□□□□ 0.21
PMS1P54277 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms