Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.06□□□□□ -0.16
SMSP52788 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.06□□□□□ -0.16
SMSP52788 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.06□□□□□ -0.16
SMSP52788 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 BX640514.1-201ENST00000583223 1918 ntBASIC14.06□□□□□ -0.16
SMSP52788 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMSP52788 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SMSP52788 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 MIR1908-201ENST00000410394 80 ntBASIC14.06□□□□□ -0.16
SMSP52788 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.06□□□□□ -0.16
SMSP52788 YBX1P6-201ENST00000442962 1002 ntBASIC14.06□□□□□ -0.16
SMSP52788 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SMSP52788 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.06□□□□□ -0.16
SMSP52788 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMSP52788 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.06□□□□□ -0.16
SMSP52788 AL359711.2-201ENST00000563105 872 ntBASIC14.06□□□□□ -0.16
SMSP52788 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.06□□□□□ -0.16
SMSP52788 BRI3BPP1-201ENST00000594224 787 ntBASIC14.06□□□□□ -0.16
SMSP52788 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SMSP52788 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 AC020907.1-201ENST00000616460 1350 ntBASIC14.06□□□□□ -0.16
SMSP52788 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 AC117489.1-201ENST00000625169 3217 ntBASIC14.05□□□□□ -0.16
SMSP52788 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SMSP52788 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
SMSP52788 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SMSP52788 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.05□□□□□ -0.16
SMSP52788 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SMSP52788 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.05□□□□□ -0.16
SMSP52788 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.05□□□□□ -0.16
SMSP52788 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SMSP52788 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 AC092933.1-201ENST00000393644 945 ntBASIC14.05□□□□□ -0.16
SMSP52788 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.05□□□□□ -0.16
SMSP52788 AC099336.1-201ENST00000417053 1171 ntBASIC14.05□□□□□ -0.16
SMSP52788 BCYRN1-201ENST00000418539 200 ntBASIC14.05□□□□□ -0.16
SMSP52788 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.05□□□□□ -0.16
SMSP52788 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.05□□□□□ -0.16
SMSP52788 RPL13P2-201ENST00000440687 659 ntBASIC14.05□□□□□ -0.16
SMSP52788 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SMSP52788 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.05□□□□□ -0.16
SMSP52788 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.05□□□□□ -0.16
SMSP52788 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.05□□□□□ -0.16
SMSP52788 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.05□□□□□ -0.16
SMSP52788 AL391069.4-201ENST00000609583 481 ntBASIC14.05□□□□□ -0.16
SMSP52788 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.05□□□□□ -0.16
SMSP52788 GPR182-203ENST00000622922 591 ntBASIC14.05□□□□□ -0.16
SMSP52788 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.05□□□□□ -0.16
SMSP52788 AC068587.10-201ENST00000641210 219 ntBASIC14.05□□□□□ -0.16
SMSP52788 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SMSP52788 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.05□□□□□ -0.16
SMSP52788 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SMSP52788 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.05□□□□□ -0.16
SMSP52788 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMSP52788 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
SMSP52788 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms