Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCN3P51790 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN3P51790 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN3P51790 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.28■□□□□ 0.2
CLCN3P51790 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN3P51790 AC097724.1-201ENST00000609581 426 ntBASIC16.28■□□□□ 0.2
CLCN3P51790 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLCN3P51790 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCN3P51790 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN3P51790 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCN3P51790 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN3P51790 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN3P51790 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN3P51790 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN3P51790 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN3P51790 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN3P51790 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN3P51790 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN3P51790 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CLCN3P51790 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CLCN3P51790 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN3P51790 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCN3P51790 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLCN3P51790 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN3P51790 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCN3P51790 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CLCN3P51790 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLCN3P51790 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN3P51790 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN3P51790 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCN3P51790 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLCN3P51790 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN3P51790 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN3P51790 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN3P51790 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLCN3P51790 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.27■□□□□ 0.2
CLCN3P51790 AL008707.1-201ENST00000422498 534 ntBASIC16.27■□□□□ 0.2
CLCN3P51790 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCN3P51790 Z97180.1-201ENST00000445173 988 ntBASIC16.27■□□□□ 0.2
CLCN3P51790 AL035414.1-201ENST00000451327 857 ntBASIC16.27■□□□□ 0.2
CLCN3P51790 RCC2P8-201ENST00000502779 1035 ntBASIC16.27■□□□□ 0.2
CLCN3P51790 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.27■□□□□ 0.2
CLCN3P51790 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.27■□□□□ 0.2
CLCN3P51790 AC009779.1-201ENST00000551138 283 ntBASIC16.27■□□□□ 0.2
CLCN3P51790 AC105129.2-201ENST00000559536 390 ntBASIC16.27■□□□□ 0.2
CLCN3P51790 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCN3P51790 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.27■□□□□ 0.2
CLCN3P51790 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCN3P51790 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCN3P51790 AL132994.2-201ENST00000603120 687 ntBASIC16.27■□□□□ 0.2
CLCN3P51790 AP000346.4-201ENST00000614827 381 ntBASIC16.27■□□□□ 0.2
CLCN3P51790 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCN3P51790 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.27■□□□□ 0.2
CLCN3P51790 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN3P51790 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN3P51790 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN3P51790 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
CLCN3P51790 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN3P51790 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN3P51790 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN3P51790 FLJ16779-201ENST00000612722 7638 ntBASIC16.27■□□□□ 0.19
CLCN3P51790 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.27■□□□□ 0.19
CLCN3P51790 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
CLCN3P51790 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN3P51790 AC018529.2-202ENST00000611482 3087 ntBASIC16.27■□□□□ 0.19
CLCN3P51790 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN3P51790 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.27■□□□□ 0.19
CLCN3P51790 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CLCN3P51790 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN3P51790 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.27■□□□□ 0.19
CLCN3P51790 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCN3P51790 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN3P51790 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN3P51790 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLCN3P51790 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.26■□□□□ 0.19
CLCN3P51790 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCN3P51790 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 AC245884.6-201ENST00000515672 1067 ntBASIC16.26■□□□□ 0.19
CLCN3P51790 AC024681.1-201ENST00000521917 487 ntBASIC16.26■□□□□ 0.19
CLCN3P51790 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 AC091812.3-201ENST00000621362 345 ntBASIC16.26■□□□□ 0.19
CLCN3P51790 CU633904.3-201ENST00000624042 1029 ntBASIC16.26■□□□□ 0.19
CLCN3P51790 AC100757.4-201ENST00000626934 759 ntBASIC16.26■□□□□ 0.19
CLCN3P51790 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCN3P51790 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN3P51790 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLCN3P51790 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLCN3P51790 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN3P51790 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms