Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC012441.2-201ENST00000444843 739 ntBASIC12.88□□□□□ -0.35
HCFC1P51610 FTH1P22-201ENST00000456305 520 ntBASIC12.88□□□□□ -0.35
HCFC1P51610 RN7SL81P-201ENST00000493781 261 ntBASIC12.88□□□□□ -0.35
HCFC1P51610 AC026434.2-201ENST00000506094 1078 ntBASIC12.88□□□□□ -0.35
HCFC1P51610 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HCFC1P51610 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 AL360270.3-201ENST00000609118 1348 ntBASIC12.88□□□□□ -0.35
HCFC1P51610 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.88□□□□□ -0.35
HCFC1P51610 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.88□□□□□ -0.35
HCFC1P51610 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.88□□□□□ -0.35
HCFC1P51610 AP002803.1-201ENST00000528836 498 ntBASIC12.88□□□□□ -0.35
HCFC1P51610 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.88□□□□□ -0.35
HCFC1P51610 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.88□□□□□ -0.35
HCFC1P51610 MIR4522-201ENST00000584932 87 ntBASIC12.88□□□□□ -0.35
HCFC1P51610 AC005632.3-201ENST00000605544 308 ntBASIC12.88□□□□□ -0.35
HCFC1P51610 AC092299.1-201ENST00000632679 757 ntBASIC12.88□□□□□ -0.35
HCFC1P51610 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 LINC00528-201ENST00000600723 2160 ntBASIC12.87□□□□□ -0.35
HCFC1P51610 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HCFC1P51610 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 REXO1L2P-201ENST00000425429 2069 ntBASIC12.87□□□□□ -0.35
HCFC1P51610 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HCFC1P51610 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.87□□□□□ -0.35
HCFC1P51610 AL627231.1-201ENST00000394467 1125 ntBASIC12.87□□□□□ -0.35
HCFC1P51610 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.87□□□□□ -0.35
HCFC1P51610 SCARNA21-201ENST00000517026 139 ntBASIC12.87□□□□□ -0.35
HCFC1P51610 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.87□□□□□ -0.35
HCFC1P51610 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
HCFC1P51610 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.87□□□□□ -0.35
HCFC1P51610 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HCFC1P51610 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HCFC1P51610 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 FRMPD2B-201ENST00000431305 1347 ntBASIC12.87□□□□□ -0.35
HCFC1P51610 AC144522.1-201ENST00000625111 1658 ntBASIC12.87□□□□□ -0.35
HCFC1P51610 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.87□□□□□ -0.35
HCFC1P51610 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.87□□□□□ -0.35
HCFC1P51610 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.87□□□□□ -0.35
HCFC1P51610 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HCFC1P51610 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HCFC1P51610 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HCFC1P51610 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HCFC1P51610 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
HCFC1P51610 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.86□□□□□ -0.35
HCFC1P51610 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HCFC1P51610 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms