Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 CES1P2-201ENST00000566467 1242 ntBASIC25.53■■□□□ 1.68
SMARCA2P51531 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC25.53■■□□□ 1.68
SMARCA2P51531 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC25.53■■□□□ 1.68
SMARCA2P51531 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
SMARCA2P51531 AC020904.3-201ENST00000624199 442 ntBASIC25.53■■□□□ 1.68
SMARCA2P51531 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
SMARCA2P51531 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC25.53■■□□□ 1.68
SMARCA2P51531 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC25.53■■□□□ 1.68
SMARCA2P51531 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC25.53■■□□□ 1.68
SMARCA2P51531 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMARCA2P51531 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC25.52■■□□□ 1.68
SMARCA2P51531 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
SMARCA2P51531 OR7E115P-201ENST00000382617 1024 ntBASIC25.52■■□□□ 1.68
SMARCA2P51531 SNORA57-201ENST00000383870 149 ntBASIC25.52■■□□□ 1.68
SMARCA2P51531 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC25.52■■□□□ 1.68
SMARCA2P51531 NRADDP-201ENST00000437305 691 ntBASIC25.52■■□□□ 1.68
SMARCA2P51531 HIST1H2APS2-201ENST00000454426 370 ntBASIC25.52■■□□□ 1.68
SMARCA2P51531 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SMARCA2P51531 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC25.52■■□□□ 1.68
SMARCA2P51531 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC25.52■■□□□ 1.68
SMARCA2P51531 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
SMARCA2P51531 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
SMARCA2P51531 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SMARCA2P51531 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC25.52■■□□□ 1.68
SMARCA2P51531 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC25.52■■□□□ 1.68
SMARCA2P51531 PDXDC2P-206ENST00000534700 1315 ntBASIC25.52■■□□□ 1.68
SMARCA2P51531 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC25.52■■□□□ 1.68
SMARCA2P51531 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC25.52■■□□□ 1.68
SMARCA2P51531 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC25.52■■□□□ 1.68
SMARCA2P51531 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 VENTXP4-201ENST00000449029 958 ntBASIC25.52■■□□□ 1.68
SMARCA2P51531 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC25.52■■□□□ 1.68
SMARCA2P51531 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC25.52■■□□□ 1.68
SMARCA2P51531 RN7SL375P-201ENST00000492442 298 ntBASIC25.52■■□□□ 1.68
SMARCA2P51531 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC25.52■■□□□ 1.68
SMARCA2P51531 CMC2-204ENST00000562713 573 ntTSL 3 BASIC25.52■■□□□ 1.68
SMARCA2P51531 CMC2-209ENST00000565108 399 ntTSL 2 BASIC25.52■■□□□ 1.68
SMARCA2P51531 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC25.52■■□□□ 1.68
SMARCA2P51531 FBXO36P1-201ENST00000579006 471 ntBASIC25.52■■□□□ 1.68
SMARCA2P51531 AL009176.1-201ENST00000607876 650 ntBASIC25.52■■□□□ 1.68
SMARCA2P51531 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC25.52■■□□□ 1.68
SMARCA2P51531 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMARCA2P51531 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC25.51■■□□□ 1.67
SMARCA2P51531 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCA2P51531 ACE3P-201ENST00000423435 1973 ntBASIC25.51■■□□□ 1.67
SMARCA2P51531 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCA2P51531 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCA2P51531 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
SMARCA2P51531 PRAL-201ENST00000624952 3286 ntBASIC25.51■■□□□ 1.67
SMARCA2P51531 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCA2P51531 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCA2P51531 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC25.51■■□□□ 1.67
SMARCA2P51531 NHP2P1-201ENST00000335274 462 ntBASIC25.51■■□□□ 1.67
SMARCA2P51531 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMARCA2P51531 PGAM1P11-201ENST00000416729 680 ntBASIC25.51■■□□□ 1.67
SMARCA2P51531 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC25.51■■□□□ 1.67
SMARCA2P51531 EEF1GP8-201ENST00000506566 1154 ntBASIC25.51■■□□□ 1.67
SMARCA2P51531 AC113347.2-201ENST00000512350 279 ntBASIC25.51■■□□□ 1.67
SMARCA2P51531 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC25.51■■□□□ 1.67
SMARCA2P51531 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC25.51■■□□□ 1.67
SMARCA2P51531 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
SMARCA2P51531 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SMARCA2P51531 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SMARCA2P51531 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SMARCA2P51531 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SMARCA2P51531 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SMARCA2P51531 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC25.5■■□□□ 1.67
SMARCA2P51531 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SMARCA2P51531 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SMARCA2P51531 AL161932.2-201ENST00000435436 679 ntBASIC25.5■■□□□ 1.67
SMARCA2P51531 HNRNPA1P5-201ENST00000558213 966 ntBASIC25.5■■□□□ 1.67
SMARCA2P51531 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC25.5■■□□□ 1.67
SMARCA2P51531 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC25.5■■□□□ 1.67
SMARCA2P51531 AC005274.1-201ENST00000623460 802 ntBASIC25.5■■□□□ 1.67
SMARCA2P51531 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC25.5■■□□□ 1.67
SMARCA2P51531 DOC2GP-204ENST00000639052 2548 ntBASIC25.5■■□□□ 1.67
SMARCA2P51531 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SMARCA2P51531 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SMARCA2P51531 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
SMARCA2P51531 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC25.5■■□□□ 1.67
SMARCA2P51531 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms