Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.54■□□□□ 0.08
MMP13P45452 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.54■□□□□ 0.08
MMP13P45452 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MMP13P45452 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
MMP13P45452 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
MMP13P45452 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 AC055811.4-201ENST00000624039 1754 ntBASIC15.54■□□□□ 0.08
MMP13P45452 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
MMP13P45452 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP13P45452 TCAF1P1-201ENST00000414990 2232 ntBASIC15.53■□□□□ 0.08
MMP13P45452 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP13P45452 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.53■□□□□ 0.08
MMP13P45452 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MMP13P45452 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
MMP13P45452 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MMP13P45452 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MMP13P45452 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.53■□□□□ 0.08
MMP13P45452 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MMP13P45452 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 ACKR1-201ENST00000368121 1240 ntBASIC15.53■□□□□ 0.08
MMP13P45452 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.53■□□□□ 0.08
MMP13P45452 HLA-K-203ENST00000430151 1046 ntBASIC15.53■□□□□ 0.08
MMP13P45452 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.53■□□□□ 0.08
MMP13P45452 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.53■□□□□ 0.08
MMP13P45452 AC114812.1-204ENST00000449669 728 ntBASIC15.53■□□□□ 0.08
MMP13P45452 TPT1P11-201ENST00000458482 498 ntBASIC15.53■□□□□ 0.08
MMP13P45452 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.53■□□□□ 0.08
MMP13P45452 AC009486.1-201ENST00000569860 813 ntBASIC15.53■□□□□ 0.08
MMP13P45452 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.53■□□□□ 0.08
MMP13P45452 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP13P45452 AP005019.2-201ENST00000615104 511 ntBASIC15.53■□□□□ 0.08
MMP13P45452 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.53■□□□□ 0.08
MMP13P45452 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP13P45452 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.53■□□□□ 0.08
MMP13P45452 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MMP13P45452 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP13P45452 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 AC023090.2-201ENST00000625182 2110 ntBASIC15.53■□□□□ 0.08
MMP13P45452 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP13P45452 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.53■□□□□ 0.08
MMP13P45452 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 AC126755.1-201ENST00000525846 6405 ntBASIC15.53■□□□□ 0.08
MMP13P45452 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP13P45452 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.52■□□□□ 0.08
MMP13P45452 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.52■□□□□ 0.08
MMP13P45452 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
MMP13P45452 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP13P45452 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP13P45452 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MMP13P45452 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP13P45452 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
MMP13P45452 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP13P45452 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.52■□□□□ 0.08
MMP13P45452 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP13P45452 LILRP1-201ENST00000444199 1370 ntBASIC15.52■□□□□ 0.08
MMP13P45452 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
MMP13P45452 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP13P45452 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
MMP13P45452 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
MMP13P45452 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
MMP13P45452 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.52■□□□□ 0.08
MMP13P45452 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms