Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AL591424.1-201ENST00000442569 1213 ntBASIC13.28□□□□□ -0.28
CD40LGP29965 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.28□□□□□ -0.28
CD40LGP29965 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.28□□□□□ -0.28
CD40LGP29965 AC024267.1-201ENST00000582320 895 ntBASIC13.28□□□□□ -0.28
CD40LGP29965 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.28□□□□□ -0.28
CD40LGP29965 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40LGP29965 AL049840.3-201ENST00000602669 611 ntBASIC13.28□□□□□ -0.28
CD40LGP29965 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40LGP29965 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40LGP29965 AC004790.2-201ENST00000623588 572 ntBASIC13.28□□□□□ -0.28
CD40LGP29965 AC007064.4-201ENST00000637740 555 ntBASIC13.28□□□□□ -0.28
CD40LGP29965 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CD40LGP29965 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CD40LGP29965 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CD40LGP29965 AC090643.2-201ENST00000623442 2029 ntBASIC13.28□□□□□ -0.28
CD40LGP29965 AC018665.1-201ENST00000622927 1362 ntBASIC13.28□□□□□ -0.28
CD40LGP29965 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40LGP29965 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 AL022323.5-201ENST00000624101 2059 ntBASIC13.28□□□□□ -0.28
CD40LGP29965 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.28□□□□□ -0.28
CD40LGP29965 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.28□□□□□ -0.28
CD40LGP29965 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.28□□□□□ -0.28
CD40LGP29965 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD40LGP29965 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.28□□□□□ -0.28
CD40LGP29965 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CD40LGP29965 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.28□□□□□ -0.28
CD40LGP29965 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CD40LGP29965 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40LGP29965 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40LGP29965 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.27□□□□□ -0.28
CD40LGP29965 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40LGP29965 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.27□□□□□ -0.28
CD40LGP29965 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.27□□□□□ -0.28
CD40LGP29965 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CD40LGP29965 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.27□□□□□ -0.28
CD40LGP29965 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.27□□□□□ -0.28
CD40LGP29965 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40LGP29965 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40LGP29965 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.27□□□□□ -0.28
CD40LGP29965 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
CD40LGP29965 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40LGP29965 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40LGP29965 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD40LGP29965 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.27□□□□□ -0.28
CD40LGP29965 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.27□□□□□ -0.28
CD40LGP29965 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.27□□□□□ -0.28
CD40LGP29965 AC104457.1-201ENST00000401024 814 ntBASIC13.27□□□□□ -0.29
CD40LGP29965 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 RNA5SP416-201ENST00000516838 111 ntBASIC13.27□□□□□ -0.29
CD40LGP29965 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CD40LGP29965 IGHV3-22-201ENST00000520721 359 ntBASIC13.27□□□□□ -0.29
CD40LGP29965 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CD40LGP29965 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.27□□□□□ -0.29
CD40LGP29965 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.27□□□□□ -0.29
CD40LGP29965 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40LGP29965 AL645728.2-202ENST00000641679 227 ntBASIC13.27□□□□□ -0.29
CD40LGP29965 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
CD40LGP29965 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40LGP29965 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CD40LGP29965 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CD40LGP29965 AC104109.2-201ENST00000602919 1418 ntBASIC13.27□□□□□ -0.29
CD40LGP29965 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.27□□□□□ -0.29
CD40LGP29965 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CD40LGP29965 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40LGP29965 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CD40LGP29965 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40LGP29965 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CD40LGP29965 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.27□□□□□ -0.29
CD40LGP29965 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.27□□□□□ -0.29
CD40LGP29965 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 AC131212.3-201ENST00000624087 4219 ntBASIC13.27□□□□□ -0.29
CD40LGP29965 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CD40LGP29965 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.27□□□□□ -0.29
CD40LGP29965 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD40LGP29965 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CD40LGP29965 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CD40LGP29965 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms