Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
SHC1P29353 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
SHC1P29353 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SHC1P29353 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SHC1P29353 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
SHC1P29353 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHC1P29353 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SHC1P29353 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SHC1P29353 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
SHC1P29353 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 ACKR1-201ENST00000368121 1240 ntBASIC13.73□□□□□ -0.21
SHC1P29353 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.73□□□□□ -0.21
SHC1P29353 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.73□□□□□ -0.21
SHC1P29353 SLC25A47P1-201ENST00000531577 414 ntBASIC13.73□□□□□ -0.21
SHC1P29353 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.73□□□□□ -0.21
SHC1P29353 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SHC1P29353 AL928921.2-201ENST00000641325 2442 ntBASIC13.73□□□□□ -0.21
SHC1P29353 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.73□□□□□ -0.21
SHC1P29353 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHC1P29353 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SHC1P29353 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.72□□□□□ -0.21
SHC1P29353 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
SHC1P29353 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 HSPA7-201ENST00000445535 1927 ntBASIC13.72□□□□□ -0.21
SHC1P29353 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.72□□□□□ -0.21
SHC1P29353 AC136759.1-202ENST00000530858 2194 ntBASIC13.72□□□□□ -0.21
SHC1P29353 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 KRT8P35-201ENST00000483942 1338 ntBASIC13.72□□□□□ -0.21
SHC1P29353 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SHC1P29353 AC010327.5-201ENST00000586923 3061 ntBASIC13.72□□□□□ -0.21
SHC1P29353 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
SHC1P29353 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SHC1P29353 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.72□□□□□ -0.21
SHC1P29353 AL645937.2-201ENST00000396808 931 ntBASIC13.72□□□□□ -0.21
SHC1P29353 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.72□□□□□ -0.21
SHC1P29353 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHC1P29353 U91328.1-201ENST00000437528 223 ntBASIC13.72□□□□□ -0.21
SHC1P29353 BCRP2-202ENST00000447763 634 ntBASIC13.72□□□□□ -0.21
SHC1P29353 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.72□□□□□ -0.21
SHC1P29353 BCRP6-201ENST00000510112 632 ntBASIC13.72□□□□□ -0.21
SHC1P29353 BCRP7-201ENST00000511549 544 ntBASIC13.72□□□□□ -0.21
SHC1P29353 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms