Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 BCRP2-202ENST00000447763 634 ntBASIC13.39□□□□□ -0.27
HLA-DOBP13765 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 USP32P1-208ENST00000506594 1164 ntBASIC13.39□□□□□ -0.27
HLA-DOBP13765 BCRP6-201ENST00000510112 632 ntBASIC13.39□□□□□ -0.27
HLA-DOBP13765 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 BCRP7-201ENST00000511549 544 ntBASIC13.39□□□□□ -0.27
HLA-DOBP13765 SLC25A47P1-201ENST00000531577 414 ntBASIC13.39□□□□□ -0.27
HLA-DOBP13765 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 GNRHR2-203ENST00000581100 1187 ntBASIC13.39□□□□□ -0.27
HLA-DOBP13765 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 AC008735.3-201ENST00000596646 500 ntBASIC13.39□□□□□ -0.27
HLA-DOBP13765 IGHV3-72-202ENST00000621503 303 ntBASIC13.39□□□□□ -0.27
HLA-DOBP13765 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 INE2-201ENST00000630399 1874 ntBASIC13.39□□□□□ -0.27
HLA-DOBP13765 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DOBP13765 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DOBP13765 CLUHP2-201ENST00000426660 1303 ntBASIC13.39□□□□□ -0.27
HLA-DOBP13765 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 AL035633.1-201ENST00000406139 838 ntBASIC13.38□□□□□ -0.27
HLA-DOBP13765 AL512384.1-201ENST00000406683 331 ntBASIC13.38□□□□□ -0.27
HLA-DOBP13765 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 AC007969.1-201ENST00000433675 447 ntBASIC13.38□□□□□ -0.27
HLA-DOBP13765 TTTY23B-201ENST00000442790 549 ntBASIC13.38□□□□□ -0.27
HLA-DOBP13765 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 LINC01230-201ENST00000625222 3017 ntBASIC13.38□□□□□ -0.27
HLA-DOBP13765 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms