Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 BX284668.2-205ENST00000619677 828 ntBASIC13.95□□□□□ -0.18
CCL4P13236 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCL4P13236 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL4P13236 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL4P13236 AC132872.4-202ENST00000622924 2756 ntBASIC13.95□□□□□ -0.18
CCL4P13236 FLJ16779-201ENST00000612722 7638 ntBASIC13.95□□□□□ -0.18
CCL4P13236 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCL4P13236 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL4P13236 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL4P13236 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CCL4P13236 LINC01101-201ENST00000622953 1884 ntBASIC13.95□□□□□ -0.18
CCL4P13236 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL4P13236 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL4P13236 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL4P13236 AL136172.1-201ENST00000598590 1394 ntBASIC13.95□□□□□ -0.18
CCL4P13236 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL4P13236 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL4P13236 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL4P13236 AC007950.2-201ENST00000615045 2347 ntBASIC13.95□□□□□ -0.18
CCL4P13236 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCL4P13236 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CCL4P13236 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL4P13236 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL4P13236 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL4P13236 AP000356.3-201ENST00000382243 753 ntBASIC13.94□□□□□ -0.18
CCL4P13236 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.94□□□□□ -0.18
CCL4P13236 XBP1P1-201ENST00000436573 652 ntBASIC13.94□□□□□ -0.18
CCL4P13236 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL4P13236 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL4P13236 NPM1P43-201ENST00000558669 786 ntBASIC13.94□□□□□ -0.18
CCL4P13236 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCL4P13236 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL4P13236 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL4P13236 MIR4750-201ENST00000584564 56 ntBASIC13.94□□□□□ -0.18
CCL4P13236 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL4P13236 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL4P13236 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.94□□□□□ -0.18
CCL4P13236 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL4P13236 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
CCL4P13236 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.94□□□□□ -0.18
CCL4P13236 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CCL4P13236 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCL4P13236 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL4P13236 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL4P13236 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CCL4P13236 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL4P13236 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 MRPL37P1-201ENST00000592451 1337 ntBASIC13.93□□□□□ -0.18
CCL4P13236 AC074138.1-201ENST00000611182 1303 ntBASIC13.93□□□□□ -0.18
CCL4P13236 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL4P13236 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CCL4P13236 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL4P13236 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL4P13236 KRT18P36-201ENST00000411618 1276 ntBASIC13.93□□□□□ -0.18
CCL4P13236 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.93□□□□□ -0.18
CCL4P13236 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.93□□□□□ -0.18
CCL4P13236 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCL4P13236 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL4P13236 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL4P13236 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL4P13236 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CCL4P13236 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL4P13236 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL4P13236 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL4P13236 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms