Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 MIR3180-2-201ENST00000581748 88 ntBASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 AL132780.4-201ENST00000624870 1135 ntBASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.55■□□□□ 0.72
CSB-PGBD3P0DP91 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 AC023024.2-201ENST00000623561 1993 ntBASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 AL157792.1-201ENST00000488281 530 ntBASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 POLD4-208ENST00000532830 904 ntTSL 3 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 AC005618.3-201ENST00000624928 458 ntBASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 AC127024.7-201ENST00000625101 200 ntBASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CSB-PGBD3P0DP91 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 DUX4L50-201ENST00000455245 715 ntBASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 FTH1P22-201ENST00000456305 520 ntBASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSB-PGBD3P0DP91 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 AHCYP4-201ENST00000419201 1315 ntBASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 KRT8P31-201ENST00000504812 1408 ntBASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 AC084018.2-201ENST00000613093 2607 ntBASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSB-PGBD3P0DP91 HIST2H2BA-201ENST00000412169 381 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms