Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TPM3P06753 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.79■□□□□ 0.28
TPM3P06753 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TPM3P06753 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TPM3P06753 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.79■□□□□ 0.28
TPM3P06753 AC020910.6-201ENST00000623084 1459 ntBASIC16.79■□□□□ 0.28
TPM3P06753 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.79■□□□□ 0.28
TPM3P06753 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPM3P06753 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.79■□□□□ 0.28
TPM3P06753 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TPM3P06753 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.79■□□□□ 0.28
TPM3P06753 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TPM3P06753 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 CETN4P-206ENST00000642099 2168 ntBASIC16.78■□□□□ 0.28
TPM3P06753 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TPM3P06753 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TPM3P06753 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TPM3P06753 TOMM22P5-201ENST00000416399 439 ntBASIC16.78■□□□□ 0.28
TPM3P06753 AC004832.2-201ENST00000426397 482 ntBASIC16.78■□□□□ 0.28
TPM3P06753 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TPM3P06753 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM3P06753 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TPM3P06753 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM3P06753 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.78■□□□□ 0.28
TPM3P06753 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.78■□□□□ 0.28
TPM3P06753 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM3P06753 AL589739.1-201ENST00000607720 493 ntBASIC16.78■□□□□ 0.28
TPM3P06753 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM3P06753 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.78■□□□□ 0.28
TPM3P06753 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 AL033527.5-202ENST00000641632 1098 ntBASIC16.78■□□□□ 0.28
TPM3P06753 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TPM3P06753 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TPM3P06753 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPM3P06753 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 AC005562.1-201ENST00000583030 3219 ntBASIC16.77■□□□□ 0.28
TPM3P06753 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.77■□□□□ 0.28
TPM3P06753 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TPM3P06753 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
TPM3P06753 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC16.77■□□□□ 0.28
TPM3P06753 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 ELL2P1-201ENST00000413990 1906 ntBASIC16.77■□□□□ 0.28
TPM3P06753 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TPM3P06753 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
TPM3P06753 RBPMS2P1-201ENST00000437762 623 ntBASIC16.77■□□□□ 0.28
TPM3P06753 RPL13P2-201ENST00000440687 659 ntBASIC16.77■□□□□ 0.28
TPM3P06753 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.77■□□□□ 0.28
TPM3P06753 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TPM3P06753 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.77■□□□□ 0.28
TPM3P06753 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.77■□□□□ 0.28
TPM3P06753 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TPM3P06753 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.77■□□□□ 0.27
TPM3P06753 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.77■□□□□ 0.27
TPM3P06753 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TPM3P06753 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
TPM3P06753 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM3P06753 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TPM3P06753 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM3P06753 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TPM3P06753 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.77■□□□□ 0.27
TPM3P06753 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms