Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MT-ND1P03886 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 AC025048.3-201ENST00000590609 569 ntBASIC14.15□□□□□ -0.14
MT-ND1P03886 AC005702.4-201ENST00000618393 416 ntBASIC14.15□□□□□ -0.14
MT-ND1P03886 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.15□□□□□ -0.14
MT-ND1P03886 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
MT-ND1P03886 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.15□□□□□ -0.14
MT-ND1P03886 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MT-ND1P03886 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
MT-ND1P03886 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MT-ND1P03886 AL360270.3-201ENST00000609118 1348 ntBASIC14.15□□□□□ -0.15
MT-ND1P03886 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
MT-ND1P03886 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
MT-ND1P03886 RPL37AP1-201ENST00000412502 279 ntBASIC14.14□□□□□ -0.15
MT-ND1P03886 AC015922.1-201ENST00000421102 1152 ntBASIC14.14□□□□□ -0.15
MT-ND1P03886 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.14□□□□□ -0.15
MT-ND1P03886 HLA-J-203ENST00000494367 1087 ntBASIC14.14□□□□□ -0.15
MT-ND1P03886 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.14□□□□□ -0.15
MT-ND1P03886 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.14□□□□□ -0.15
MT-ND1P03886 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 AC027612.4-201ENST00000605371 583 ntBASIC14.14□□□□□ -0.15
MT-ND1P03886 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 AC134684.3-201ENST00000641758 218 ntBASIC14.14□□□□□ -0.15
MT-ND1P03886 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
MT-ND1P03886 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MT-ND1P03886 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.14□□□□□ -0.15
MT-ND1P03886 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
MT-ND1P03886 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
MT-ND1P03886 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.13□□□□□ -0.15
MT-ND1P03886 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
MT-ND1P03886 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
MT-ND1P03886 AGGF1P1-201ENST00000509500 2073 ntBASIC14.13□□□□□ -0.15
MT-ND1P03886 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
MT-ND1P03886 TCAF1P1-201ENST00000414990 2232 ntBASIC14.13□□□□□ -0.15
MT-ND1P03886 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
MT-ND1P03886 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
MT-ND1P03886 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
MT-ND1P03886 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MT-ND1P03886 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms