Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 BAX-205ENST00000391871 687 ntTSL 5 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 KRT18P4-201ENST00000422599 1288 ntBASIC21.69■■□□□ 1.06
RAPGEF3O95398 CDCA4P4-201ENST00000435216 680 ntBASIC21.69■■□□□ 1.06
RAPGEF3O95398 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 AC113347.2-201ENST00000512350 279 ntBASIC21.69■■□□□ 1.06
RAPGEF3O95398 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 KLF17P1-201ENST00000547105 1126 ntBASIC21.69■■□□□ 1.06
RAPGEF3O95398 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 HNRNPA1P16-201ENST00000575692 955 ntBASIC21.69■■□□□ 1.06
RAPGEF3O95398 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 AC090386.2-201ENST00000623010 1039 ntBASIC21.69■■□□□ 1.06
RAPGEF3O95398 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAPGEF3O95398 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC21.69■■□□□ 1.06
RAPGEF3O95398 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 OR7E115P-201ENST00000382617 1024 ntBASIC21.68■■□□□ 1.06
RAPGEF3O95398 PPP1R2P4-201ENST00000424051 595 ntBASIC21.68■■□□□ 1.06
RAPGEF3O95398 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 IFNWP2-201ENST00000431203 580 ntBASIC21.68■■□□□ 1.06
RAPGEF3O95398 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 GRPEL2P1-201ENST00000453145 339 ntBASIC21.68■■□□□ 1.06
RAPGEF3O95398 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAPGEF3O95398 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RAPGEF3O95398 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.67■■□□□ 1.06
RAPGEF3O95398 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC21.67■■□□□ 1.06
RAPGEF3O95398 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RAPGEF3O95398 AL157823.1-201ENST00000403727 628 ntBASIC21.67■■□□□ 1.06
RAPGEF3O95398 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC21.67■■□□□ 1.06
RAPGEF3O95398 GALP-202ENST00000440823 889 ntTSL 5 BASIC21.67■■□□□ 1.06
RAPGEF3O95398 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 EEF1GP8-201ENST00000506566 1154 ntBASIC21.67■■□□□ 1.06
RAPGEF3O95398 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC21.67■■□□□ 1.06
RAPGEF3O95398 AL132994.1-201ENST00000554098 400 ntBASIC21.67■■□□□ 1.06
RAPGEF3O95398 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC21.67■■□□□ 1.06
RAPGEF3O95398 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC21.67■■□□□ 1.06
RAPGEF3O95398 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAPGEF3O95398 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms