Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
NKX2-2O95096 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX2-2O95096 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX2-2O95096 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-2O95096 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 AC015656.1-201ENST00000624209 3578 ntBASIC13.72□□□□□ -0.21
NKX2-2O95096 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-2O95096 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX2-2O95096 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX2-2O95096 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.72□□□□□ -0.21
NKX2-2O95096 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NKX2-2O95096 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.72□□□□□ -0.21
NKX2-2O95096 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX2-2O95096 C2orf69P2-201ENST00000562032 1123 ntBASIC13.72□□□□□ -0.21
NKX2-2O95096 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
NKX2-2O95096 MIR6074-201ENST00000612054 107 ntBASIC13.72□□□□□ -0.21
NKX2-2O95096 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 PDIA3P1-201ENST00000471856 1510 ntBASIC13.72□□□□□ -0.21
NKX2-2O95096 KHSRPP1-201ENST00000427983 1768 ntBASIC13.72□□□□□ -0.21
NKX2-2O95096 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-2O95096 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 OR2I1P-210ENST00000642037 4691 ntBASIC13.72□□□□□ -0.21
NKX2-2O95096 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 OR2I1P-209ENST00000641730 5365 ntBASIC13.72□□□□□ -0.21
NKX2-2O95096 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-2O95096 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-2O95096 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX2-2O95096 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-2O95096 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX2-2O95096 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX2-2O95096 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX2-2O95096 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX2-2O95096 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.71□□□□□ -0.21
NKX2-2O95096 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.71□□□□□ -0.21
NKX2-2O95096 AHCYP2-201ENST00000430630 1300 ntBASIC13.71□□□□□ -0.21
NKX2-2O95096 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX2-2O95096 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.71□□□□□ -0.21
NKX2-2O95096 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX2-2O95096 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 AL136309.1-201ENST00000403917 691 ntBASIC13.71□□□□□ -0.21
NKX2-2O95096 MIR1202-201ENST00000408529 83 ntBASIC13.71□□□□□ -0.21
NKX2-2O95096 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.71□□□□□ -0.21
NKX2-2O95096 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.71□□□□□ -0.21
NKX2-2O95096 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.71□□□□□ -0.21
NKX2-2O95096 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.71□□□□□ -0.21
NKX2-2O95096 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.71□□□□□ -0.21
NKX2-2O95096 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NKX2-2O95096 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.71□□□□□ -0.21
NKX2-2O95096 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 KRT17P8-201ENST00000540749 863 ntBASIC13.71□□□□□ -0.21
NKX2-2O95096 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.71□□□□□ -0.21
NKX2-2O95096 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX2-2O95096 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.71□□□□□ -0.21
NKX2-2O95096 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.71□□□□□ -0.21
NKX2-2O95096 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX2-2O95096 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.71□□□□□ -0.21
NKX2-2O95096 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 AC139749.1-202ENST00000617529 3139 ntBASIC13.71□□□□□ -0.21
NKX2-2O95096 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX2-2O95096 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NKX2-2O95096 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.71□□□□□ -0.22
NKX2-2O95096 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.71□□□□□ -0.22
NKX2-2O95096 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.71□□□□□ -0.22
NKX2-2O95096 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
NKX2-2O95096 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NKX2-2O95096 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
NKX2-2O95096 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.71□□□□□ -0.22
NKX2-2O95096 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NKX2-2O95096 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NKX2-2O95096 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NKX2-2O95096 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX2-2O95096 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX2-2O95096 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms