Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF13O43567 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RNF13O43567 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF13O43567 AL391825.1-201ENST00000457671 1364 ntBASIC13.65□□□□□ -0.22
RNF13O43567 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF13O43567 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.65□□□□□ -0.22
RNF13O43567 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF13O43567 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF13O43567 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF13O43567 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF13O43567 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF13O43567 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF13O43567 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF13O43567 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RNF13O43567 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF13O43567 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF13O43567 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF13O43567 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF13O43567 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
RNF13O43567 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
RNF13O43567 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RNF13O43567 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.64□□□□□ -0.23
RNF13O43567 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
RNF13O43567 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RNF13O43567 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF13O43567 AL442647.2-201ENST00000429864 857 ntBASIC13.64□□□□□ -0.23
RNF13O43567 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF13O43567 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF13O43567 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF13O43567 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF13O43567 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF13O43567 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF13O43567 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF13O43567 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RNF13O43567 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF13O43567 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF13O43567 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.64□□□□□ -0.23
RNF13O43567 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 AL359881.3-201ENST00000602640 1721 ntBASIC13.64□□□□□ -0.23
RNF13O43567 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF13O43567 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF13O43567 AL137784.3-201ENST00000623858 2288 ntBASIC13.64□□□□□ -0.23
RNF13O43567 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RNF13O43567 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
RNF13O43567 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
RNF13O43567 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 MBLAC2-202ENST00000514906 1936 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms