Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
KCNQ3O43525 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
KCNQ3O43525 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.89■□□□□ 0.61
KCNQ3O43525 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.89■□□□□ 0.61
KCNQ3O43525 FTLP1-201ENST00000449155 526 ntBASIC18.89■□□□□ 0.61
KCNQ3O43525 MPRIPP1-201ENST00000452433 1089 ntBASIC18.89■□□□□ 0.61
KCNQ3O43525 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.89■□□□□ 0.61
KCNQ3O43525 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.89■□□□□ 0.61
KCNQ3O43525 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.89■□□□□ 0.61
KCNQ3O43525 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.89■□□□□ 0.61
KCNQ3O43525 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.89■□□□□ 0.61
KCNQ3O43525 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.89■□□□□ 0.61
KCNQ3O43525 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.89■□□□□ 0.61
KCNQ3O43525 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
KCNQ3O43525 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.89■□□□□ 0.61
KCNQ3O43525 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.89■□□□□ 0.61
KCNQ3O43525 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
KCNQ3O43525 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
KCNQ3O43525 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNQ3O43525 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNQ3O43525 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNQ3O43525 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
KCNQ3O43525 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
KCNQ3O43525 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNQ3O43525 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
KCNQ3O43525 U62317.3-201ENST00000608319 855 ntBASIC18.88■□□□□ 0.61
KCNQ3O43525 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNQ3O43525 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 AC015688.4-201ENST00000580780 1647 ntBASIC18.88■□□□□ 0.61
KCNQ3O43525 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNQ3O43525 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNQ3O43525 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNQ3O43525 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.87■□□□□ 0.61
KCNQ3O43525 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.87■□□□□ 0.61
KCNQ3O43525 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
KCNQ3O43525 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 RPL8P2-201ENST00000430538 502 ntBASIC18.87■□□□□ 0.61
KCNQ3O43525 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.87■□□□□ 0.61
KCNQ3O43525 RN7SL67P-201ENST00000492147 296 ntBASIC18.87■□□□□ 0.61
KCNQ3O43525 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.87■□□□□ 0.61
KCNQ3O43525 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.87■□□□□ 0.61
KCNQ3O43525 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.87■□□□□ 0.61
KCNQ3O43525 MIR3677-201ENST00000578964 60 ntBASIC18.87■□□□□ 0.61
KCNQ3O43525 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.87■□□□□ 0.61
KCNQ3O43525 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.87■□□□□ 0.61
KCNQ3O43525 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNQ3O43525 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.86■□□□□ 0.61
KCNQ3O43525 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNQ3O43525 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.86■□□□□ 0.61
KCNQ3O43525 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNQ3O43525 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
KCNQ3O43525 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KCNQ3O43525 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.86■□□□□ 0.61
KCNQ3O43525 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.86■□□□□ 0.61
KCNQ3O43525 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNQ3O43525 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KCNQ3O43525 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
KCNQ3O43525 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
KCNQ3O43525 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KCNQ3O43525 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.86■□□□□ 0.61
KCNQ3O43525 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms