Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PAX4O43316 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PAX4O43316 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PAX4O43316 SNX18-202ENST00000343017 3140 ntBASIC10.77□□□□□ -0.69
PAX4O43316 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PAX4O43316 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.77□□□□□ -0.69
PAX4O43316 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
PAX4O43316 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC10.77□□□□□ -0.69
PAX4O43316 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PAX4O43316 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PAX4O43316 AC022762.2-201ENST00000600308 1353 ntBASIC10.77□□□□□ -0.69
PAX4O43316 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
PAX4O43316 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.76□□□□□ -0.69
PAX4O43316 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 MECR-202ENST00000373791 2416 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
PAX4O43316 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.76□□□□□ -0.69
PAX4O43316 AP006294.1-201ENST00000415407 339 ntBASIC10.76□□□□□ -0.69
PAX4O43316 AC098850.1-201ENST00000419919 790 ntBASIC10.76□□□□□ -0.69
PAX4O43316 HSFY1P1-201ENST00000423928 1178 ntBASIC10.76□□□□□ -0.69
PAX4O43316 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC10.76□□□□□ -0.69
PAX4O43316 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 GALT-202ENST00000450095 1280 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 ELK1P1-201ENST00000485699 580 ntBASIC10.76□□□□□ -0.69
PAX4O43316 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.76□□□□□ -0.69
PAX4O43316 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 COA4-204ENST00000541455 1038 ntTSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
PAX4O43316 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
PAX4O43316 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 MIR3197-201ENST00000582241 73 ntBASIC10.76□□□□□ -0.69
PAX4O43316 CU634019.7-201ENST00000624153 1185 ntBASIC10.76□□□□□ -0.69
PAX4O43316 FP236241.2-201ENST00000624906 1185 ntBASIC10.76□□□□□ -0.69
PAX4O43316 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 AL358472.5-202ENST00000641448 1267 ntBASIC10.76□□□□□ -0.69
PAX4O43316 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 AGAP7P-201ENST00000582299 2062 ntBASIC10.76□□□□□ -0.69
PAX4O43316 AGAP14-201ENST00000624701 2060 ntBASIC10.76□□□□□ -0.69
PAX4O43316 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.76□□□□□ -0.69
PAX4O43316 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
PAX4O43316 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 ZBED1P1-201ENST00000502364 1930 ntBASIC10.76□□□□□ -0.69
PAX4O43316 REXO1L4P-201ENST00000605109 1937 ntBASIC10.76□□□□□ -0.69
PAX4O43316 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PAX4O43316 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
PAX4O43316 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
PAX4O43316 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms