Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC18O15417 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC18O15417 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TNRC18O15417 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.45■□□□□ 0.06
TNRC18O15417 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.45■□□□□ 0.06
TNRC18O15417 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.45■□□□□ 0.06
TNRC18O15417 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TNRC18O15417 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TNRC18O15417 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC18O15417 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC18O15417 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC18O15417 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC18O15417 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TNRC18O15417 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC18O15417 SSR4P1-201ENST00000415143 412 ntBASIC15.45■□□□□ 0.06
TNRC18O15417 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC15.45■□□□□ 0.06
TNRC18O15417 VDAC1P11-201ENST00000458323 852 ntBASIC15.45■□□□□ 0.06
TNRC18O15417 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TNRC18O15417 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC15.45■□□□□ 0.06
TNRC18O15417 AC009132.1-201ENST00000565194 320 ntBASIC15.45■□□□□ 0.06
TNRC18O15417 MIR7704-201ENST00000610524 59 ntBASIC15.45■□□□□ 0.06
TNRC18O15417 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC15.45■□□□□ 0.06
TNRC18O15417 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNRC18O15417 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC15.44■□□□□ 0.06
TNRC18O15417 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TNRC18O15417 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.44■□□□□ 0.06
TNRC18O15417 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 RPS15P5-201ENST00000449885 432 ntBASIC15.44■□□□□ 0.06
TNRC18O15417 AC007690.1-201ENST00000451924 468 ntBASIC15.44■□□□□ 0.06
TNRC18O15417 RN7SL477P-201ENST00000488440 286 ntBASIC15.44■□□□□ 0.06
TNRC18O15417 AC100858.1-201ENST00000514059 1228 ntBASIC15.44■□□□□ 0.06
TNRC18O15417 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC15.44■□□□□ 0.06
TNRC18O15417 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC15.44■□□□□ 0.06
TNRC18O15417 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TNRC18O15417 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.44■□□□□ 0.06
TNRC18O15417 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
TNRC18O15417 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.44■□□□□ 0.06
TNRC18O15417 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.44■□□□□ 0.06
TNRC18O15417 HNRNPA1P68-201ENST00000425806 979 ntBASIC15.44■□□□□ 0.06
TNRC18O15417 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC15.44■□□□□ 0.06
TNRC18O15417 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC15.44■□□□□ 0.06
TNRC18O15417 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
TNRC18O15417 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TNRC18O15417 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNRC18O15417 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.44■□□□□ 0.06
TNRC18O15417 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.43■□□□□ 0.06
TNRC18O15417 KRT8P18-201ENST00000413425 1445 ntBASIC15.43■□□□□ 0.06
TNRC18O15417 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
TNRC18O15417 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 MESTP4-201ENST00000412333 1204 ntBASIC15.43■□□□□ 0.06
TNRC18O15417 AC012066.1-201ENST00000439252 694 ntBASIC15.43■□□□□ 0.06
TNRC18O15417 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC15.43■□□□□ 0.06
TNRC18O15417 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC15.43■□□□□ 0.06
TNRC18O15417 FAM187B2P-201ENST00000577135 713 ntBASIC15.43■□□□□ 0.06
TNRC18O15417 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC15.43■□□□□ 0.06
TNRC18O15417 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.43■□□□□ 0.06
TNRC18O15417 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TNRC18O15417 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.43■□□□□ 0.06
TNRC18O15417 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.43■□□□□ 0.06
TNRC18O15417 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TNRC18O15417 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC15.43■□□□□ 0.06
TNRC18O15417 TUBB8P9-201ENST00000422534 1276 ntBASIC15.43■□□□□ 0.06
TNRC18O15417 TUBB8P10-201ENST00000430210 1279 ntBASIC15.43■□□□□ 0.06
TNRC18O15417 AC092573.1-201ENST00000433054 884 ntBASIC15.43■□□□□ 0.06
TNRC18O15417 TPI1P2-201ENST00000491343 752 ntBASIC15.43■□□□□ 0.06
TNRC18O15417 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC15.43■□□□□ 0.06
TNRC18O15417 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC15.43■□□□□ 0.06
TNRC18O15417 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC15.43■□□□□ 0.06
TNRC18O15417 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.43■□□□□ 0.06
TNRC18O15417 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.43■□□□□ 0.06
TNRC18O15417 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.43■□□□□ 0.06
TNRC18O15417 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNRC18O15417 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.43■□□□□ 0.06
TNRC18O15417 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms