Protein–RNA interactions for Protein: O00192

ARVCF, Armadillo repeat protein deleted in velo-cardio-facial syndrome, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCFO00192 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARVCFO00192 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARVCFO00192 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.13■□□□□ 0.17
ARVCFO00192 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARVCFO00192 AC132872.4-202ENST00000622924 2756 ntBASIC16.13■□□□□ 0.17
ARVCFO00192 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARVCFO00192 KRT8P28-201ENST00000433288 1390 ntBASIC16.13■□□□□ 0.17
ARVCFO00192 WASH3P-207ENST00000560956 1394 ntBASIC16.13■□□□□ 0.17
ARVCFO00192 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARVCFO00192 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
ARVCFO00192 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 LINC01815-202ENST00000641468 1409 ntBASIC16.12■□□□□ 0.17
ARVCFO00192 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ARVCFO00192 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 AL357563.1-201ENST00000404728 395 ntBASIC16.12■□□□□ 0.17
ARVCFO00192 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.12■□□□□ 0.17
ARVCFO00192 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.12■□□□□ 0.17
ARVCFO00192 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.12■□□□□ 0.17
ARVCFO00192 AC010234.1-201ENST00000494599 870 ntBASIC16.12■□□□□ 0.17
ARVCFO00192 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.12■□□□□ 0.17
ARVCFO00192 ALG1L13P-202ENST00000519320 584 ntBASIC16.12■□□□□ 0.17
ARVCFO00192 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.12■□□□□ 0.17
ARVCFO00192 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.12■□□□□ 0.17
ARVCFO00192 AC005041.3-201ENST00000606287 649 ntBASIC16.12■□□□□ 0.17
ARVCFO00192 AC138466.4-201ENST00000623965 852 ntBASIC16.12■□□□□ 0.17
ARVCFO00192 LINC00431-202ENST00000636375 159 ntBASIC16.12■□□□□ 0.17
ARVCFO00192 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 AC023024.2-201ENST00000623561 1993 ntBASIC16.12■□□□□ 0.17
ARVCFO00192 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ARVCFO00192 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.12■□□□□ 0.17
ARVCFO00192 AL590440.2-201ENST00000641973 1595 ntBASIC16.12■□□□□ 0.17
ARVCFO00192 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.12■□□□□ 0.17
ARVCFO00192 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.12■□□□□ 0.17
ARVCFO00192 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.12■□□□□ 0.17
ARVCFO00192 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARVCFO00192 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.12■□□□□ 0.17
ARVCFO00192 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.11■□□□□ 0.17
ARVCFO00192 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.11■□□□□ 0.17
ARVCFO00192 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.11■□□□□ 0.17
ARVCFO00192 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.11■□□□□ 0.17
ARVCFO00192 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.11■□□□□ 0.17
ARVCFO00192 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.11■□□□□ 0.17
ARVCFO00192 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.11■□□□□ 0.17
ARVCFO00192 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.11■□□□□ 0.17
ARVCFO00192 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.11■□□□□ 0.17
ARVCFO00192 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.11■□□□□ 0.17
ARVCFO00192 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.11■□□□□ 0.17
ARVCFO00192 MIR5196-201ENST00000578146 115 ntBASIC16.11■□□□□ 0.17
ARVCFO00192 FO393412.1-201ENST00000619841 382 ntBASIC16.11■□□□□ 0.17
ARVCFO00192 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.11■□□□□ 0.17
ARVCFO00192 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.11■□□□□ 0.17
ARVCFO00192 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARVCFO00192 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.11■□□□□ 0.17
ARVCFO00192 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ARVCFO00192 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.11■□□□□ 0.17
ARVCFO00192 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARVCFO00192 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.1■□□□□ 0.17
ARVCFO00192 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.1■□□□□ 0.17
ARVCFO00192 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ARVCFO00192 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARVCFO00192 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms