Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TSSC2-201ENST00000450217 709 ntBASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AL513480.1-201ENST00000451731 511 ntBASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ACTL9-202ENST00000612068 1252 ntBASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AL365181.3-201ENST00000605886 3222 ntBASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC9.46□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms