Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 MBP-201ENST00000354542 575 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 AC018635.2-201ENST00000608625 364 ntBASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 FAM90A2P-201ENST00000511144 1395 ntBASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 FAM90A25P-201ENST00000528404 1395 ntBASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
CCDC144AA2RUR9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 POR-201ENST00000394893 2532 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 AC007718.1-201ENST00000621078 280 ntBASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144AA2RUR9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 FGFR3P1-201ENST00000449999 601 ntBASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 AC051619.9-201ENST00000623237 597 ntBASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC21.09■□□□□ 0.97
CCDC144AA2RUR9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 AL354702.1-201ENST00000442006 1960 ntBASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 JTB-202ENST00000356648 1040 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 RPL8P2-201ENST00000430538 502 ntBASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms