Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPDC1A2A3K4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 RPL13AP20-201ENST00000459725 609 ntBASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 RNA5SP486-201ENST00000515961 83 ntBASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 RN7SL560P-201ENST00000577943 264 ntBASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPDC1A2A3K4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 AL354702.1-201ENST00000442006 1960 ntBASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 MIR1202-201ENST00000408529 83 ntBASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 FAM8A2P-201ENST00000528813 1142 ntBASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 ECM1P1-201ENST00000604092 1279 ntBASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms