Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 BID-212ENST00000614949 1988 ntTSL 5 BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01558Q9Y6Z2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01558Q9Y6Z2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01558Q9Y6Z2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01558Q9Y6Z2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC11.96□□□□□ -0.5
LINC01558Q9Y6Z2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01558Q9Y6Z2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01558Q9Y6Z2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01558Q9Y6Z2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01558Q9Y6Z2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01558Q9Y6Z2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01558Q9Y6Z2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01558Q9Y6Z2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01558Q9Y6Z2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC01558Q9Y6Z2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01558Q9Y6Z2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
LINC01558Q9Y6Z2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms