Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AL022069.1-201ENST00000568025 1636 ntBASIC26.2■■□□□ 1.78
CLIC4Q9Y696 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.2■■□□□ 1.78
CLIC4Q9Y696 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.2■■□□□ 1.78
CLIC4Q9Y696 AL161729.1-201ENST00000604104 1402 ntBASIC26.2■■□□□ 1.78
CLIC4Q9Y696 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLIC4Q9Y696 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CLIC4Q9Y696 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.19■■□□□ 1.78
CLIC4Q9Y696 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.19■■□□□ 1.78
CLIC4Q9Y696 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLIC4Q9Y696 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CLIC4Q9Y696 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLIC4Q9Y696 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLIC4Q9Y696 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLIC4Q9Y696 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.19■■□□□ 1.78
CLIC4Q9Y696 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.19■■□□□ 1.78
CLIC4Q9Y696 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CLIC4Q9Y696 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
CLIC4Q9Y696 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLIC4Q9Y696 AL033527.3-201ENST00000566366 1196 ntBASIC26.18■■□□□ 1.78
CLIC4Q9Y696 AC074183.2-201ENST00000623112 922 ntBASIC26.18■■□□□ 1.78
CLIC4Q9Y696 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLIC4Q9Y696 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLIC4Q9Y696 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CLIC4Q9Y696 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.17■■□□□ 1.78
CLIC4Q9Y696 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.17■■□□□ 1.78
CLIC4Q9Y696 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.17■■□□□ 1.78
CLIC4Q9Y696 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.17■■□□□ 1.78
CLIC4Q9Y696 AC012354.3-201ENST00000623734 483 ntBASIC26.17■■□□□ 1.78
CLIC4Q9Y696 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CLIC4Q9Y696 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLIC4Q9Y696 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLIC4Q9Y696 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CLIC4Q9Y696 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CLIC4Q9Y696 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.16■■□□□ 1.78
CLIC4Q9Y696 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLIC4Q9Y696 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CLIC4Q9Y696 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.16■■□□□ 1.78
CLIC4Q9Y696 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLIC4Q9Y696 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.16■■□□□ 1.78
CLIC4Q9Y696 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
CLIC4Q9Y696 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.15■■□□□ 1.78
CLIC4Q9Y696 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.15■■□□□ 1.78
CLIC4Q9Y696 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CLIC4Q9Y696 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.15■■□□□ 1.78
CLIC4Q9Y696 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CLIC4Q9Y696 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CLIC4Q9Y696 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CLIC4Q9Y696 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
CLIC4Q9Y696 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
CLIC4Q9Y696 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLIC4Q9Y696 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.14■■□□□ 1.78
CLIC4Q9Y696 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
CLIC4Q9Y696 AF131216.4-201ENST00000638924 1588 ntBASIC26.14■■□□□ 1.78
CLIC4Q9Y696 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
CLIC4Q9Y696 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CLIC4Q9Y696 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
CLIC4Q9Y696 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.14■■□□□ 1.77
CLIC4Q9Y696 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
CLIC4Q9Y696 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
CLIC4Q9Y696 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLIC4Q9Y696 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLIC4Q9Y696 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLIC4Q9Y696 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.13■■□□□ 1.77
CLIC4Q9Y696 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.13■■□□□ 1.77
CLIC4Q9Y696 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLIC4Q9Y696 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.12■■□□□ 1.77
CLIC4Q9Y696 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLIC4Q9Y696 ANOS2P-203ENST00000472227 1816 ntBASIC26.12■■□□□ 1.77
CLIC4Q9Y696 KRT18P24-201ENST00000344739 1156 ntBASIC26.12■■□□□ 1.77
CLIC4Q9Y696 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.12■■□□□ 1.77
CLIC4Q9Y696 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.12■■□□□ 1.77
CLIC4Q9Y696 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.12■■□□□ 1.77
CLIC4Q9Y696 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.12■■□□□ 1.77
CLIC4Q9Y696 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CLIC4Q9Y696 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CLIC4Q9Y696 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.12■■□□□ 1.77
CLIC4Q9Y696 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLIC4Q9Y696 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CLIC4Q9Y696 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CLIC4Q9Y696 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.11■■□□□ 1.77
CLIC4Q9Y696 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CLIC4Q9Y696 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.11■■□□□ 1.77
CLIC4Q9Y696 AC103834.1-201ENST00000520383 144 ntBASIC26.1■■□□□ 1.77
CLIC4Q9Y696 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.1■■□□□ 1.77
CLIC4Q9Y696 MIR4281-201ENST00000580852 62 ntBASIC26.1■■□□□ 1.77
CLIC4Q9Y696 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.1■■□□□ 1.77
CLIC4Q9Y696 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 THA1P-201ENST00000590384 1145 ntBASIC26.09■■□□□ 1.77
CLIC4Q9Y696 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms