Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 AC087623.3-201ENST00000607047 1098 ntBASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 AC092666.2-201ENST00000613287 246 ntBASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.46■■□□□ 1.67
SCN10AQ9Y5Y9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.46■■□□□ 1.67
SCN10AQ9Y5Y9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCN10AQ9Y5Y9 AL022069.1-201ENST00000568025 1636 ntBASIC25.46■■□□□ 1.67
SCN10AQ9Y5Y9 AC006455.2-201ENST00000429931 906 ntBASIC25.45■■□□□ 1.67
SCN10AQ9Y5Y9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SCN10AQ9Y5Y9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.45■■□□□ 1.67
SCN10AQ9Y5Y9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.45■■□□□ 1.67
SCN10AQ9Y5Y9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
SCN10AQ9Y5Y9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
SCN10AQ9Y5Y9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SCN10AQ9Y5Y9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SCN10AQ9Y5Y9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.45■■□□□ 1.66
SCN10AQ9Y5Y9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCN10AQ9Y5Y9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCN10AQ9Y5Y9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCN10AQ9Y5Y9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.44■■□□□ 1.66
SCN10AQ9Y5Y9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.44■■□□□ 1.66
SCN10AQ9Y5Y9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.44■■□□□ 1.66
SCN10AQ9Y5Y9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SCN10AQ9Y5Y9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCN10AQ9Y5Y9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SCN10AQ9Y5Y9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SCN10AQ9Y5Y9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SCN10AQ9Y5Y9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
SCN10AQ9Y5Y9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.43■■□□□ 1.66
SCN10AQ9Y5Y9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.43■■□□□ 1.66
SCN10AQ9Y5Y9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SCN10AQ9Y5Y9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.43■■□□□ 1.66
SCN10AQ9Y5Y9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SCN10AQ9Y5Y9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SCN10AQ9Y5Y9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
SCN10AQ9Y5Y9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.42■■□□□ 1.66
SCN10AQ9Y5Y9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.42■■□□□ 1.66
SCN10AQ9Y5Y9 AC099791.1-201ENST00000416440 715 ntBASIC25.42■■□□□ 1.66
SCN10AQ9Y5Y9 AC136469.2-201ENST00000623944 1028 ntBASIC25.42■■□□□ 1.66
SCN10AQ9Y5Y9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 AC241377.3-202ENST00000626088 1088 ntBASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 AC241585.3-202ENST00000628937 1088 ntBASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 AC245100.8-202ENST00000629247 1058 ntBASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.41■■□□□ 1.66
SCN10AQ9Y5Y9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SCN10AQ9Y5Y9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
SCN10AQ9Y5Y9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SCN10AQ9Y5Y9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SCN10AQ9Y5Y9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCN10AQ9Y5Y9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCN10AQ9Y5Y9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SCN10AQ9Y5Y9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCN10AQ9Y5Y9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCN10AQ9Y5Y9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCN10AQ9Y5Y9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCN10AQ9Y5Y9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCN10AQ9Y5Y9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCN10AQ9Y5Y9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SCN10AQ9Y5Y9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.38■■□□□ 1.65
SCN10AQ9Y5Y9 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.38■■□□□ 1.65
SCN10AQ9Y5Y9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SCN10AQ9Y5Y9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCN10AQ9Y5Y9 AC008764.7-201ENST00000593779 1081 ntBASIC25.38■■□□□ 1.65
SCN10AQ9Y5Y9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCN10AQ9Y5Y9 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.37■■□□□ 1.65
SCN10AQ9Y5Y9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCN10AQ9Y5Y9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCN10AQ9Y5Y9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.37■■□□□ 1.65
SCN10AQ9Y5Y9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCN10AQ9Y5Y9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCN10AQ9Y5Y9 AL162430.1-201ENST00000480705 870 ntBASIC25.36■■□□□ 1.65
SCN10AQ9Y5Y9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.36■■□□□ 1.65
SCN10AQ9Y5Y9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SCN10AQ9Y5Y9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SCN10AQ9Y5Y9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCN10AQ9Y5Y9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCN10AQ9Y5Y9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCN10AQ9Y5Y9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.35■■□□□ 1.65
SCN10AQ9Y5Y9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCN10AQ9Y5Y9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCN10AQ9Y5Y9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.34■■□□□ 1.65
SCN10AQ9Y5Y9 IRS3P-201ENST00000223076 1006 ntBASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms