Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB6Q9Y5F9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGB6Q9Y5F9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGB6Q9Y5F9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB6Q9Y5F9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDHGB6Q9Y5F9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB6Q9Y5F9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB6Q9Y5F9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGB6Q9Y5F9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHGB6Q9Y5F9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGB6Q9Y5F9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB6Q9Y5F9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHGB6Q9Y5F9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGB6Q9Y5F9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDHGB6Q9Y5F9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGB6Q9Y5F9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.48■■□□□ 1.03
PCDHGB6Q9Y5F9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGB6Q9Y5F9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGB6Q9Y5F9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGB6Q9Y5F9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.48■■□□□ 1.03
PCDHGB6Q9Y5F9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB6Q9Y5F9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 AC022211.4-201ENST00000625094 2161 ntBASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 AC010997.5-201ENST00000609182 354 ntBASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
PCDHGB6Q9Y5F9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 SLC6A10P-202ENST00000431994 2058 ntBASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 MIR6724-1-201ENST00000616420 92 ntBASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 MIR6724-2-201ENST00000616483 92 ntBASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 MIR6724-4-201ENST00000617390 92 ntBASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 MIR6724-3-201ENST00000622482 92 ntBASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB6Q9Y5F9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB6Q9Y5F9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB6Q9Y5F9 MIR935-201ENST00000401179 91 ntBASIC21.45■■□□□ 1.02
PCDHGB6Q9Y5F9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
PCDHGB6Q9Y5F9 MTDHP2-201ENST00000601468 714 ntBASIC21.45■■□□□ 1.02
PCDHGB6Q9Y5F9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHGB6Q9Y5F9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHGB6Q9Y5F9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB6Q9Y5F9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGB6Q9Y5F9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGB6Q9Y5F9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB6Q9Y5F9 AP003733.4-201ENST00000623785 1697 ntBASIC21.44■■□□□ 1.02
PCDHGB6Q9Y5F9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB6Q9Y5F9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB6Q9Y5F9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGB6Q9Y5F9 AF131216.4-201ENST00000638924 1588 ntBASIC21.44■■□□□ 1.02
PCDHGB6Q9Y5F9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB6Q9Y5F9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB6Q9Y5F9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB6Q9Y5F9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB6Q9Y5F9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB6Q9Y5F9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHGB6Q9Y5F9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB6Q9Y5F9 AC090877.2-201ENST00000558441 1738 ntBASIC21.43■■□□□ 1.02
PCDHGB6Q9Y5F9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB6Q9Y5F9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PCDHGB6Q9Y5F9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB6Q9Y5F9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB6Q9Y5F9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB6Q9Y5F9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHGB6Q9Y5F9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 MIR3621-201ENST00000580529 85 ntBASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGB6Q9Y5F9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 MIR6089-201ENST00000616698 64 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms