Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHB1Q9Y5F3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
PCDHB1Q9Y5F3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHB1Q9Y5F3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.89■■□□□ 1.25
PCDHB1Q9Y5F3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.89■■□□□ 1.25
PCDHB1Q9Y5F3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
PCDHB1Q9Y5F3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDHB1Q9Y5F3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PCDHB1Q9Y5F3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHB1Q9Y5F3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PCDHB1Q9Y5F3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDHB1Q9Y5F3 AL117332.1-201ENST00000622628 974 ntBASIC22.88■■□□□ 1.25
PCDHB1Q9Y5F3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHB1Q9Y5F3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHB1Q9Y5F3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHB1Q9Y5F3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHB1Q9Y5F3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHB1Q9Y5F3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHB1Q9Y5F3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHB1Q9Y5F3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.87■■□□□ 1.25
PCDHB1Q9Y5F3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHB1Q9Y5F3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHB1Q9Y5F3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHB1Q9Y5F3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHB1Q9Y5F3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB1Q9Y5F3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB1Q9Y5F3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB1Q9Y5F3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHB1Q9Y5F3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHB1Q9Y5F3 AC010997.5-201ENST00000609182 354 ntBASIC22.86■■□□□ 1.25
PCDHB1Q9Y5F3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHB1Q9Y5F3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 AC110285.6-201ENST00000617652 491 ntBASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 AC004812.2-201ENST00000611079 2094 ntBASIC22.85■■□□□ 1.25
PCDHB1Q9Y5F3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHB1Q9Y5F3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
PCDHB1Q9Y5F3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PCDHB1Q9Y5F3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.83■■□□□ 1.25
PCDHB1Q9Y5F3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PCDHB1Q9Y5F3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PCDHB1Q9Y5F3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB1Q9Y5F3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHB1Q9Y5F3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
PCDHB1Q9Y5F3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB1Q9Y5F3 AL022069.1-201ENST00000568025 1636 ntBASIC22.82■■□□□ 1.24
PCDHB1Q9Y5F3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PCDHB1Q9Y5F3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB1Q9Y5F3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB1Q9Y5F3 MIR3621-201ENST00000580529 85 ntBASIC22.82■■□□□ 1.24
PCDHB1Q9Y5F3 MTDHP2-201ENST00000601468 714 ntBASIC22.82■■□□□ 1.24
PCDHB1Q9Y5F3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB1Q9Y5F3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB1Q9Y5F3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB1Q9Y5F3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB1Q9Y5F3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PCDHB1Q9Y5F3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.8■■□□□ 1.24
PCDHB1Q9Y5F3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB1Q9Y5F3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHB1Q9Y5F3 MIR6724-1-201ENST00000616420 92 ntBASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms