Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AC131274.2-201ENST00000580697 1507 ntBASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KDM3AQ9Y4C1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3AQ9Y4C1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
KDM3AQ9Y4C1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3AQ9Y4C1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3AQ9Y4C1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.84■■□□□ 1.73
KDM3AQ9Y4C1 AL117332.1-201ENST00000622628 974 ntBASIC25.84■■□□□ 1.73
KDM3AQ9Y4C1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3AQ9Y4C1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3AQ9Y4C1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 AC131281.2-201ENST00000520478 145 ntBASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 MIR3621-201ENST00000580529 85 ntBASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
KDM3AQ9Y4C1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
KDM3AQ9Y4C1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM3AQ9Y4C1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
KDM3AQ9Y4C1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM3AQ9Y4C1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
KDM3AQ9Y4C1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM3AQ9Y4C1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM3AQ9Y4C1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.81■■□□□ 1.72
KDM3AQ9Y4C1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM3AQ9Y4C1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM3AQ9Y4C1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
KDM3AQ9Y4C1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.8■■□□□ 1.72
KDM3AQ9Y4C1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
KDM3AQ9Y4C1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.8■■□□□ 1.72
KDM3AQ9Y4C1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.8■■□□□ 1.72
KDM3AQ9Y4C1 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.8■■□□□ 1.72
KDM3AQ9Y4C1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KDM3AQ9Y4C1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.8■■□□□ 1.72
KDM3AQ9Y4C1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.8■■□□□ 1.72
KDM3AQ9Y4C1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KDM3AQ9Y4C1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.79■■□□□ 1.72
KDM3AQ9Y4C1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
KDM3AQ9Y4C1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KDM3AQ9Y4C1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
KDM3AQ9Y4C1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
KDM3AQ9Y4C1 AC004812.2-201ENST00000611079 2094 ntBASIC25.79■■□□□ 1.72
KDM3AQ9Y4C1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KDM3AQ9Y4C1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
KDM3AQ9Y4C1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
KDM3AQ9Y4C1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
KDM3AQ9Y4C1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.77■■□□□ 1.72
KDM3AQ9Y4C1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.77■■□□□ 1.72
KDM3AQ9Y4C1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.76■■□□□ 1.71
KDM3AQ9Y4C1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
KDM3AQ9Y4C1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
KDM3AQ9Y4C1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
KDM3AQ9Y4C1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
KDM3AQ9Y4C1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
KDM3AQ9Y4C1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
KDM3AQ9Y4C1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
KDM3AQ9Y4C1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.75■■□□□ 1.71
KDM3AQ9Y4C1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
KDM3AQ9Y4C1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.75■■□□□ 1.71
KDM3AQ9Y4C1 AC004448.1-201ENST00000458332 883 ntBASIC25.74■■□□□ 1.71
KDM3AQ9Y4C1 AL356740.2-201ENST00000601559 647 ntBASIC25.74■■□□□ 1.71
KDM3AQ9Y4C1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
KDM3AQ9Y4C1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KDM3AQ9Y4C1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KDM3AQ9Y4C1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KDM3AQ9Y4C1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
KDM3AQ9Y4C1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.74■■□□□ 1.71
KDM3AQ9Y4C1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
KDM3AQ9Y4C1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.73■■□□□ 1.71
KDM3AQ9Y4C1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.73■■□□□ 1.71
KDM3AQ9Y4C1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.73■■□□□ 1.71
KDM3AQ9Y4C1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
KDM3AQ9Y4C1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
KDM3AQ9Y4C1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
KDM3AQ9Y4C1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
KDM3AQ9Y4C1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
KDM3AQ9Y4C1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
KDM3AQ9Y4C1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms