Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.4■□□□□ 0.86
LSM2Q9Y333 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM2Q9Y333 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM2Q9Y333 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM2Q9Y333 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LSM2Q9Y333 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LSM2Q9Y333 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM2Q9Y333 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM2Q9Y333 AC007375.3-201ENST00000600936 2314 ntBASIC20.4■□□□□ 0.86
LSM2Q9Y333 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LSM2Q9Y333 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LSM2Q9Y333 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LSM2Q9Y333 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSM2Q9Y333 SMPD5-203ENST00000639008 1464 ntBASIC20.39■□□□□ 0.85
LSM2Q9Y333 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LSM2Q9Y333 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.39■□□□□ 0.85
LSM2Q9Y333 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.39■□□□□ 0.85
LSM2Q9Y333 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.39■□□□□ 0.85
LSM2Q9Y333 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LSM2Q9Y333 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSM2Q9Y333 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSM2Q9Y333 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.38■□□□□ 0.85
LSM2Q9Y333 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LSM2Q9Y333 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.38■□□□□ 0.85
LSM2Q9Y333 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.38■□□□□ 0.85
LSM2Q9Y333 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LSM2Q9Y333 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.38■□□□□ 0.85
LSM2Q9Y333 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM2Q9Y333 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM2Q9Y333 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM2Q9Y333 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LSM2Q9Y333 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM2Q9Y333 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM2Q9Y333 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.37■□□□□ 0.85
LSM2Q9Y333 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSM2Q9Y333 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM2Q9Y333 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.37■□□□□ 0.85
LSM2Q9Y333 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSM2Q9Y333 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM2Q9Y333 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM2Q9Y333 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LSM2Q9Y333 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.37■□□□□ 0.85
LSM2Q9Y333 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.37■□□□□ 0.85
LSM2Q9Y333 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM2Q9Y333 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM2Q9Y333 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.36■□□□□ 0.85
LSM2Q9Y333 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM2Q9Y333 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM2Q9Y333 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
LSM2Q9Y333 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM2Q9Y333 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM2Q9Y333 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.35■□□□□ 0.85
LSM2Q9Y333 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM2Q9Y333 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM2Q9Y333 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LSM2Q9Y333 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.35■□□□□ 0.85
LSM2Q9Y333 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.35■□□□□ 0.85
LSM2Q9Y333 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM2Q9Y333 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.35■□□□□ 0.85
LSM2Q9Y333 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSM2Q9Y333 AC060814.1-201ENST00000554326 538 ntBASIC20.35■□□□□ 0.85
LSM2Q9Y333 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LSM2Q9Y333 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LSM2Q9Y333 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSM2Q9Y333 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM2Q9Y333 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM2Q9Y333 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM2Q9Y333 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM2Q9Y333 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.34■□□□□ 0.85
LSM2Q9Y333 AL024507.2-201ENST00000606070 2574 ntBASIC20.34■□□□□ 0.85
LSM2Q9Y333 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM2Q9Y333 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.34■□□□□ 0.85
LSM2Q9Y333 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
LSM2Q9Y333 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LSM2Q9Y333 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM2Q9Y333 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM2Q9Y333 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.34■□□□□ 0.85
LSM2Q9Y333 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LSM2Q9Y333 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.33■□□□□ 0.85
LSM2Q9Y333 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM2Q9Y333 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM2Q9Y333 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LSM2Q9Y333 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LSM2Q9Y333 AL161729.1-201ENST00000604104 1402 ntBASIC20.33■□□□□ 0.84
LSM2Q9Y333 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.33■□□□□ 0.84
LSM2Q9Y333 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.33■□□□□ 0.84
LSM2Q9Y333 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM2Q9Y333 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LSM2Q9Y333 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.32■□□□□ 0.84
LSM2Q9Y333 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM2Q9Y333 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
LSM2Q9Y333 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LSM2Q9Y333 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.32■□□□□ 0.84
LSM2Q9Y333 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LSM2Q9Y333 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM2Q9Y333 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM2Q9Y333 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM2Q9Y333 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM2Q9Y333 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM2Q9Y333 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms