Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 BX842568.3-201ENST00000418104 571 ntBASIC31.62■■■□□ 2.65
PHF8Q9UPP1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PHF8Q9UPP1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PHF8Q9UPP1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PHF8Q9UPP1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.61■■■□□ 2.65
PHF8Q9UPP1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
PHF8Q9UPP1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PHF8Q9UPP1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PHF8Q9UPP1 MIR3181-201ENST00000578512 73 ntBASIC31.6■■■□□ 2.65
PHF8Q9UPP1 RARRES2P11-201ENST00000635158 484 ntBASIC31.6■■■□□ 2.65
PHF8Q9UPP1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
PHF8Q9UPP1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 AK1-201ENST00000223836 736 ntTSL 3 BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 AC090192.1-201ENST00000517740 490 ntBASIC31.59■■■□□ 2.65
PHF8Q9UPP1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 IKBKGP1-201ENST00000612193 1073 ntBASIC31.59■■■□□ 2.65
PHF8Q9UPP1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PHF8Q9UPP1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PHF8Q9UPP1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.58■■■□□ 2.65
PHF8Q9UPP1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PHF8Q9UPP1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.58■■■□□ 2.65
PHF8Q9UPP1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
PHF8Q9UPP1 GRAMD4P2-201ENST00000423297 1097 ntBASIC31.58■■■□□ 2.65
PHF8Q9UPP1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PHF8Q9UPP1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC31.58■■■□□ 2.65
PHF8Q9UPP1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
PHF8Q9UPP1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PHF8Q9UPP1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PHF8Q9UPP1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.57■■■□□ 2.64
PHF8Q9UPP1 AC034268.1-201ENST00000441047 882 ntBASIC31.57■■■□□ 2.64
PHF8Q9UPP1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC31.57■■■□□ 2.64
PHF8Q9UPP1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PHF8Q9UPP1 AL022069.1-201ENST00000568025 1636 ntBASIC31.57■■■□□ 2.64
PHF8Q9UPP1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
PHF8Q9UPP1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.56■■■□□ 2.64
PHF8Q9UPP1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC31.56■■■□□ 2.64
PHF8Q9UPP1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PHF8Q9UPP1 AC009086.3-201ENST00000623486 1008 ntBASIC31.56■■■□□ 2.64
PHF8Q9UPP1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC31.56■■■□□ 2.64
PHF8Q9UPP1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PHF8Q9UPP1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
PHF8Q9UPP1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
PHF8Q9UPP1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
PHF8Q9UPP1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
PHF8Q9UPP1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PHF8Q9UPP1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC31.55■■■□□ 2.64
PHF8Q9UPP1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC31.55■■■□□ 2.64
PHF8Q9UPP1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
PHF8Q9UPP1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC31.55■■■□□ 2.64
PHF8Q9UPP1 AC022517.1-201ENST00000592429 346 ntBASIC31.55■■■□□ 2.64
PHF8Q9UPP1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
PHF8Q9UPP1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.54■■■□□ 2.64
PHF8Q9UPP1 SLC6A10P-202ENST00000431994 2058 ntBASIC31.54■■■□□ 2.64
PHF8Q9UPP1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PHF8Q9UPP1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC31.54■■■□□ 2.64
PHF8Q9UPP1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC31.54■■■□□ 2.64
PHF8Q9UPP1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC31.54■■■□□ 2.64
PHF8Q9UPP1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.54■■■□□ 2.64
PHF8Q9UPP1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC31.54■■■□□ 2.64
PHF8Q9UPP1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 AL031602.1-201ENST00000633169 911 ntBASIC31.53■■■□□ 2.64
PHF8Q9UPP1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
PHF8Q9UPP1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 MIR6089-201ENST00000616698 64 ntBASIC31.52■■■□□ 2.64
PHF8Q9UPP1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
PHF8Q9UPP1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
PHF8Q9UPP1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
PHF8Q9UPP1 KRT18P5-201ENST00000436075 1291 ntBASIC31.51■■■□□ 2.63
PHF8Q9UPP1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC31.51■■■□□ 2.63
PHF8Q9UPP1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
PHF8Q9UPP1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
PHF8Q9UPP1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC31.5■■■□□ 2.63
PHF8Q9UPP1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.49■■■□□ 2.63
PHF8Q9UPP1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms