Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC29.58■■■□□ 2.33
CCNL1Q9UK58 MIR3181-201ENST00000578512 73 ntBASIC29.58■■■□□ 2.33
CCNL1Q9UK58 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CCNL1Q9UK58 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
CCNL1Q9UK58 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.57■■■□□ 2.32
CCNL1Q9UK58 DUX4L2-201ENST00000561772 1275 ntBASIC29.57■■■□□ 2.32
CCNL1Q9UK58 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC29.57■■■□□ 2.32
CCNL1Q9UK58 DUX4L6-201ENST00000626483 1275 ntBASIC29.57■■■□□ 2.32
CCNL1Q9UK58 DUX4L1-201ENST00000627662 1275 ntBASIC29.57■■■□□ 2.32
CCNL1Q9UK58 DUX4L8-201ENST00000629013 1275 ntBASIC29.57■■■□□ 2.32
CCNL1Q9UK58 DUX4L3-201ENST00000630187 1275 ntBASIC29.57■■■□□ 2.32
CCNL1Q9UK58 DUX4L7-201ENST00000630678 1275 ntBASIC29.57■■■□□ 2.32
CCNL1Q9UK58 DUX4L5-201ENST00000630834 1275 ntBASIC29.57■■■□□ 2.32
CCNL1Q9UK58 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
CCNL1Q9UK58 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCNL1Q9UK58 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC29.56■■■□□ 2.32
CCNL1Q9UK58 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
CCNL1Q9UK58 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
CCNL1Q9UK58 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.56■■■□□ 2.32
CCNL1Q9UK58 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CCNL1Q9UK58 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.55■■■□□ 2.32
CCNL1Q9UK58 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CCNL1Q9UK58 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CCNL1Q9UK58 AC009086.3-201ENST00000623486 1008 ntBASIC29.55■■■□□ 2.32
CCNL1Q9UK58 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CCNL1Q9UK58 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.55■■■□□ 2.32
CCNL1Q9UK58 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.54■■■□□ 2.32
CCNL1Q9UK58 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC29.54■■■□□ 2.32
CCNL1Q9UK58 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CCNL1Q9UK58 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.54■■■□□ 2.32
CCNL1Q9UK58 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CCNL1Q9UK58 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
CCNL1Q9UK58 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.53■■■□□ 2.32
CCNL1Q9UK58 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CCNL1Q9UK58 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
CCNL1Q9UK58 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCNL1Q9UK58 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCNL1Q9UK58 AC004911.1-201ENST00000416316 871 ntBASIC29.52■■■□□ 2.32
CCNL1Q9UK58 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29.52■■■□□ 2.32
CCNL1Q9UK58 AC126544.1-201ENST00000580842 1059 ntBASIC29.52■■■□□ 2.32
CCNL1Q9UK58 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC29.52■■■□□ 2.32
CCNL1Q9UK58 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCNL1Q9UK58 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCNL1Q9UK58 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC29.51■■■□□ 2.32
CCNL1Q9UK58 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 RAB43-208ENST00000615093 783 ntTSL 5 BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CCNL1Q9UK58 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
CCNL1Q9UK58 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CCNL1Q9UK58 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCNL1Q9UK58 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC29.5■■■□□ 2.31
CCNL1Q9UK58 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC29.5■■■□□ 2.31
CCNL1Q9UK58 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC29.5■■■□□ 2.31
CCNL1Q9UK58 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.5■■■□□ 2.31
CCNL1Q9UK58 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.5■■■□□ 2.31
CCNL1Q9UK58 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCNL1Q9UK58 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
CCNL1Q9UK58 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 ID1-201ENST00000376105 1233 ntBASIC29.49■■■□□ 2.31
CCNL1Q9UK58 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCNL1Q9UK58 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.48■■■□□ 2.31
CCNL1Q9UK58 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCNL1Q9UK58 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CCNL1Q9UK58 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CCNL1Q9UK58 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
CCNL1Q9UK58 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
CCNL1Q9UK58 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.48■■■□□ 2.31
CCNL1Q9UK58 DLX3-202ENST00000512495 834 ntTSL 2 BASIC29.48■■■□□ 2.31
CCNL1Q9UK58 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
CCNL1Q9UK58 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CCNL1Q9UK58 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.47■■■□□ 2.31
CCNL1Q9UK58 TSPY26P-201ENST00000476365 1326 ntBASIC29.47■■■□□ 2.31
CCNL1Q9UK58 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC29.47■■■□□ 2.31
CCNL1Q9UK58 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.47■■■□□ 2.31
CCNL1Q9UK58 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.47■■■□□ 2.31
CCNL1Q9UK58 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
CCNL1Q9UK58 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.46■■■□□ 2.31
CCNL1Q9UK58 AC010501.1-201ENST00000606270 1962 ntBASIC29.46■■■□□ 2.31
CCNL1Q9UK58 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.46■■■□□ 2.31
CCNL1Q9UK58 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms