Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.37■■□□□ 1.01
KLHL1Q9NR64 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.37■■□□□ 1.01
KLHL1Q9NR64 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.37■■□□□ 1.01
KLHL1Q9NR64 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KLHL1Q9NR64 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KLHL1Q9NR64 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KLHL1Q9NR64 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KLHL1Q9NR64 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KLHL1Q9NR64 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KLHL1Q9NR64 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.36■■□□□ 1.01
KLHL1Q9NR64 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.36■■□□□ 1.01
KLHL1Q9NR64 AL117332.1-201ENST00000622628 974 ntBASIC21.36■■□□□ 1.01
KLHL1Q9NR64 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.36■■□□□ 1.01
KLHL1Q9NR64 AL139125.2-201ENST00000623134 1869 ntBASIC21.36■■□□□ 1.01
KLHL1Q9NR64 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KLHL1Q9NR64 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KLHL1Q9NR64 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
KLHL1Q9NR64 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
KLHL1Q9NR64 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
KLHL1Q9NR64 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KLHL1Q9NR64 AC131281.2-201ENST00000520478 145 ntBASIC21.34■■□□□ 1.01
KLHL1Q9NR64 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KLHL1Q9NR64 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
KLHL1Q9NR64 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KLHL1Q9NR64 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KLHL1Q9NR64 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KLHL1Q9NR64 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
KLHL1Q9NR64 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KLHL1Q9NR64 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.33■■□□□ 1.01
KLHL1Q9NR64 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.33■■□□□ 1.01
KLHL1Q9NR64 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KLHL1Q9NR64 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.33■■□□□ 1.01
KLHL1Q9NR64 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.33■■□□□ 1.01
KLHL1Q9NR64 AL356740.2-201ENST00000601559 647 ntBASIC21.33■■□□□ 1.01
KLHL1Q9NR64 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.33■■□□□ 1.01
KLHL1Q9NR64 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
KLHL1Q9NR64 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.33■■□□□ 1
KLHL1Q9NR64 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
KLHL1Q9NR64 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.33■■□□□ 1
KLHL1Q9NR64 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.32■■□□□ 1
KLHL1Q9NR64 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KLHL1Q9NR64 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.32■■□□□ 1
KLHL1Q9NR64 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.32■■□□□ 1
KLHL1Q9NR64 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.32■■□□□ 1
KLHL1Q9NR64 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.32■■□□□ 1
KLHL1Q9NR64 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.32■■□□□ 1
KLHL1Q9NR64 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.32■■□□□ 1
KLHL1Q9NR64 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.32■■□□□ 1
KLHL1Q9NR64 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.32■■□□□ 1
KLHL1Q9NR64 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KLHL1Q9NR64 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.32■■□□□ 1
KLHL1Q9NR64 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
KLHL1Q9NR64 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.31■■□□□ 1
KLHL1Q9NR64 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.31■■□□□ 1
KLHL1Q9NR64 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KLHL1Q9NR64 AL136116.3-201ENST00000402907 1138 ntBASIC21.31■■□□□ 1
KLHL1Q9NR64 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.31■■□□□ 1
KLHL1Q9NR64 MIR3621-201ENST00000580529 85 ntBASIC21.31■■□□□ 1
KLHL1Q9NR64 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.31■■□□□ 1
KLHL1Q9NR64 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.31■■□□□ 1
KLHL1Q9NR64 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.3■■□□□ 1
KLHL1Q9NR64 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
KLHL1Q9NR64 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
KLHL1Q9NR64 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KLHL1Q9NR64 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KLHL1Q9NR64 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
KLHL1Q9NR64 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.3■■□□□ 1
KLHL1Q9NR64 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.3■■□□□ 1
KLHL1Q9NR64 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
KLHL1Q9NR64 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.3■■□□□ 1
KLHL1Q9NR64 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.3■■□□□ 1
KLHL1Q9NR64 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
KLHL1Q9NR64 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.29■■□□□ 1
KLHL1Q9NR64 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.29■■□□□ 1
KLHL1Q9NR64 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KLHL1Q9NR64 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.29■■□□□ 1
KLHL1Q9NR64 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.29■■□□□ 1
KLHL1Q9NR64 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KLHL1Q9NR64 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.29■■□□□ 1
KLHL1Q9NR64 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KLHL1Q9NR64 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KLHL1Q9NR64 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.28■■□□□ 1
KLHL1Q9NR64 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KLHL1Q9NR64 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.28■■□□□ 1
KLHL1Q9NR64 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.28■■□□□ 1
KLHL1Q9NR64 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.28■■□□□ 1
KLHL1Q9NR64 SNX5-217ENST00000606557 1087 ntBASIC21.28■■□□□ 1
KLHL1Q9NR64 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms