Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.49■■□□□ 1.35
ATP13A1Q9HD20 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
ATP13A1Q9HD20 AL161729.1-201ENST00000604104 1402 ntBASIC23.49■■□□□ 1.35
ATP13A1Q9HD20 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP13A1Q9HD20 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP13A1Q9HD20 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP13A1Q9HD20 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.48■■□□□ 1.35
ATP13A1Q9HD20 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ATP13A1Q9HD20 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.48■■□□□ 1.35
ATP13A1Q9HD20 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ATP13A1Q9HD20 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.48■■□□□ 1.35
ATP13A1Q9HD20 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
ATP13A1Q9HD20 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 MIR6724-1-201ENST00000616420 92 ntBASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 MIR6724-2-201ENST00000616483 92 ntBASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 MIR6724-4-201ENST00000617390 92 ntBASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 MIR6724-3-201ENST00000622482 92 ntBASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.47■■□□□ 1.35
ATP13A1Q9HD20 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP13A1Q9HD20 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP13A1Q9HD20 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP13A1Q9HD20 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ATP13A1Q9HD20 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.46■■□□□ 1.35
ATP13A1Q9HD20 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ATP13A1Q9HD20 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
ATP13A1Q9HD20 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.45■■□□□ 1.35
ATP13A1Q9HD20 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ATP13A1Q9HD20 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.45■■□□□ 1.34
ATP13A1Q9HD20 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.45■■□□□ 1.34
ATP13A1Q9HD20 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.45■■□□□ 1.34
ATP13A1Q9HD20 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ATP13A1Q9HD20 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.45■■□□□ 1.34
ATP13A1Q9HD20 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
ATP13A1Q9HD20 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.44■■□□□ 1.34
ATP13A1Q9HD20 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ATP13A1Q9HD20 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
ATP13A1Q9HD20 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.44■■□□□ 1.34
ATP13A1Q9HD20 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATP13A1Q9HD20 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.44■■□□□ 1.34
ATP13A1Q9HD20 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ATP13A1Q9HD20 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.44■■□□□ 1.34
ATP13A1Q9HD20 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.44■■□□□ 1.34
ATP13A1Q9HD20 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
ATP13A1Q9HD20 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.43■■□□□ 1.34
ATP13A1Q9HD20 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.43■■□□□ 1.34
ATP13A1Q9HD20 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP13A1Q9HD20 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.43■■□□□ 1.34
ATP13A1Q9HD20 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP13A1Q9HD20 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP13A1Q9HD20 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
ATP13A1Q9HD20 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
ATP13A1Q9HD20 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ATP13A1Q9HD20 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.41■■□□□ 1.34
ATP13A1Q9HD20 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.41■■□□□ 1.34
ATP13A1Q9HD20 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ATP13A1Q9HD20 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.41■■□□□ 1.34
ATP13A1Q9HD20 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
ATP13A1Q9HD20 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.4■■□□□ 1.34
ATP13A1Q9HD20 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.4■■□□□ 1.34
ATP13A1Q9HD20 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
ATP13A1Q9HD20 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ATP13A1Q9HD20 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.4■■□□□ 1.34
ATP13A1Q9HD20 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.4■■□□□ 1.34
ATP13A1Q9HD20 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ATP13A1Q9HD20 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
ATP13A1Q9HD20 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
ATP13A1Q9HD20 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ATP13A1Q9HD20 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.39■■□□□ 1.33
ATP13A1Q9HD20 AL117332.1-201ENST00000622628 974 ntBASIC23.39■■□□□ 1.33
ATP13A1Q9HD20 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ATP13A1Q9HD20 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 AC005703.6-201ENST00000623265 1329 ntBASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.38■■□□□ 1.33
ATP13A1Q9HD20 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP13A1Q9HD20 AC004812.2-201ENST00000611079 2094 ntBASIC23.37■■□□□ 1.33
ATP13A1Q9HD20 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP13A1Q9HD20 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.37■■□□□ 1.33
ATP13A1Q9HD20 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ATP13A1Q9HD20 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ATP13A1Q9HD20 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.37■■□□□ 1.33
ATP13A1Q9HD20 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ATP13A1Q9HD20 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms